BLASTX nr result
ID: Panax21_contig00035625
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00035625 (403 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts... 117 1e-24 ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts... 114 8e-24 ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of... 114 8e-24 ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts... 114 1e-23 ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts... 114 1e-23 >ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis vinifera] gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera] Length = 1267 Score = 117 bits (292), Expect = 1e-24 Identities = 56/78 (71%), Positives = 64/78 (82%) Frame = +1 Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSVWPTPSDSVSE 288 MDSQ NNLY+TASQPDTGNDAYTF+EFNT GEDFDYP+F + PIR S WPTPSDS+S+ Sbjct: 1 MDSQPNNLYDTASQPDTGNDAYTFIEFNTQGEDFDYPDFRD---PIRPSAWPTPSDSISD 57 Query: 289 KPDRALSDHQSDASPISA 342 +DHQSDASP+SA Sbjct: 58 -----AADHQSDASPVSA 70 >ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis sativus] Length = 1268 Score = 114 bits (285), Expect = 8e-24 Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = +1 Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285 MDSQ NNL+ETASQPDT NDAYTFLEFNT GEDFDYPEF + PIR V WPTPSDS++ Sbjct: 1 MDSQQNNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRD---PIRPPVAWPTPSDSLA 57 Query: 286 EKPDR-ALSDHQSDASPISA 342 + DR SDHQSDASP+SA Sbjct: 58 DHTDRGGGSDHQSDASPVSA 77 >ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog [Cucumis sativus] Length = 1246 Score = 114 bits (285), Expect = 8e-24 Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = +1 Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285 MDSQ NNL+ETASQPDT NDAYTFLEFNT GEDFDYPEF + PIR V WPTPSDS++ Sbjct: 1 MDSQQNNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRD---PIRPPVAWPTPSDSLA 57 Query: 286 EKPDR-ALSDHQSDASPISA 342 + DR SDHQSDASP+SA Sbjct: 58 DHTDRGGGSDHQSDASPVSA 77 >ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max] Length = 1270 Score = 114 bits (284), Expect = 1e-23 Identities = 59/84 (70%), Positives = 66/84 (78%), Gaps = 6/84 (7%) Frame = +1 Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285 MDSQ NNL+ETASQPDTGNDAYTFLEFNT GEDFDYPEF + PIRS V WPTPSDS++ Sbjct: 1 MDSQQNNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRD---PIRSPVAWPTPSDSLA 57 Query: 286 EKPDR-----ALSDHQSDASPISA 342 + +R SDHQSD SP+SA Sbjct: 58 DPSERGGGGGGGSDHQSDTSPVSA 81 >ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max] Length = 1266 Score = 114 bits (284), Expect = 1e-23 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 4/81 (4%) Frame = +1 Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285 MDSQ NNL+ETASQPDTGNDAYTFLEFNT GEDFDYPEF + PIRS V WPTPSDS++ Sbjct: 1 MDSQQNNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRD---PIRSPVAWPTPSDSLA 57 Query: 286 EKPDR---ALSDHQSDASPIS 339 + +R SDHQSDASP+S Sbjct: 58 DPLERGGGGGSDHQSDASPVS 78