BLASTX nr result

ID: Panax21_contig00035625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035625
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts...   117   1e-24
ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts...   114   8e-24
ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of...   114   8e-24
ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts...   114   1e-23
ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts...   114   1e-23

>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
           vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
           product [Vitis vinifera]
          Length = 1267

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/78 (71%), Positives = 64/78 (82%)
 Frame = +1

Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSVWPTPSDSVSE 288
           MDSQ NNLY+TASQPDTGNDAYTF+EFNT GEDFDYP+F +   PIR S WPTPSDS+S+
Sbjct: 1   MDSQPNNLYDTASQPDTGNDAYTFIEFNTQGEDFDYPDFRD---PIRPSAWPTPSDSISD 57

Query: 289 KPDRALSDHQSDASPISA 342
                 +DHQSDASP+SA
Sbjct: 58  -----AADHQSDASPVSA 70


>ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
           sativus]
          Length = 1268

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = +1

Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285
           MDSQ NNL+ETASQPDT NDAYTFLEFNT GEDFDYPEF +   PIR  V WPTPSDS++
Sbjct: 1   MDSQQNNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRD---PIRPPVAWPTPSDSLA 57

Query: 286 EKPDR-ALSDHQSDASPISA 342
           +  DR   SDHQSDASP+SA
Sbjct: 58  DHTDRGGGSDHQSDASPVSA 77


>ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
           homolog [Cucumis sativus]
          Length = 1246

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = +1

Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285
           MDSQ NNL+ETASQPDT NDAYTFLEFNT GEDFDYPEF +   PIR  V WPTPSDS++
Sbjct: 1   MDSQQNNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRD---PIRPPVAWPTPSDSLA 57

Query: 286 EKPDR-ALSDHQSDASPISA 342
           +  DR   SDHQSDASP+SA
Sbjct: 58  DHTDRGGGSDHQSDASPVSA 77


>ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
           max]
          Length = 1270

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/84 (70%), Positives = 66/84 (78%), Gaps = 6/84 (7%)
 Frame = +1

Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285
           MDSQ NNL+ETASQPDTGNDAYTFLEFNT GEDFDYPEF +   PIRS V WPTPSDS++
Sbjct: 1   MDSQQNNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRD---PIRSPVAWPTPSDSLA 57

Query: 286 EKPDR-----ALSDHQSDASPISA 342
           +  +R       SDHQSD SP+SA
Sbjct: 58  DPSERGGGGGGGSDHQSDTSPVSA 81


>ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
           max]
          Length = 1266

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
 Frame = +1

Query: 109 MDSQANNLYETASQPDTGNDAYTFLEFNTHGEDFDYPEFPELSQPIRSSV-WPTPSDSVS 285
           MDSQ NNL+ETASQPDTGNDAYTFLEFNT GEDFDYPEF +   PIRS V WPTPSDS++
Sbjct: 1   MDSQQNNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRD---PIRSPVAWPTPSDSLA 57

Query: 286 EKPDR---ALSDHQSDASPIS 339
           +  +R     SDHQSDASP+S
Sbjct: 58  DPLERGGGGGSDHQSDASPVS 78


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