BLASTX nr result

ID: Panax21_contig00035587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035587
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269161.1| PREDICTED: uncharacterized protein LOC100264...    55   1e-08
ref|XP_002269962.2| PREDICTED: uncharacterized protein LOC100251...    65   2e-08
ref|XP_002310902.1| predicted protein [Populus trichocarpa] gi|2...    55   7e-08
ref|XP_002530377.1| protein dimerization, putative [Ricinus comm...    49   8e-06

>ref|XP_002269161.1| PREDICTED: uncharacterized protein LOC100264734 [Vitis vinifera]
          Length = 714

 Score = 54.7 bits (130), Expect(2) = 1e-08
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = +3

Query: 441 SASHYIEMILQKMGMMDLTKEILDKA*TIKMFIYNHAFVLKLLRNH 578
           SAS+ IE++L+K+GMMD  + ILDKA  I  FI++HA VLKL+RN+
Sbjct: 325 SASYCIELMLEKIGMMDPIRGILDKAKAITKFIHSHATVLKLMRNY 370



 Score = 31.2 bits (69), Expect(2) = 1e-08
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = +2

Query: 605 SKIRS*APFVTLESILAKKKGLE-IFTSAN*NTLI*MSR 718
           SKI+   PF+TLE+I+++K  L+ +F S+  N+LI  SR
Sbjct: 380 SKIKLAKPFLTLENIVSEKDNLQNMFVSSGWNSLIWASR 418


>ref|XP_002269962.2| PREDICTED: uncharacterized protein LOC100251332 [Vitis vinifera]
          Length = 709

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/51 (64%), Positives = 39/51 (76%)
 Frame = +3

Query: 441 SASHYIEMILQKMGMMDLTKEILDKA*TIKMFIYNHAFVLKLLRNHI*GHN 593
           SASH IEM+L+K+GMM  T+EILDKA TI  FIY HA VL L+RNH   H+
Sbjct: 323 SASHCIEMMLEKIGMMGTTREILDKAKTITRFIYCHAMVLNLMRNHTLVHD 373


>ref|XP_002310902.1| predicted protein [Populus trichocarpa] gi|222853805|gb|EEE91352.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score = 55.1 bits (131), Expect(2) = 7e-08
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = +3

Query: 441 SASHYIEMILQKMGMMDLTKEILDKA*TIKMFIYNHAFVLKLLRNHI 581
           SASH IE++L+K+G MD  +  L+KA  I  FIY H  VLKL+RNHI
Sbjct: 321 SASHCIELMLEKIGAMDSIRRTLEKAKIITKFIYGHKKVLKLMRNHI 367



 Score = 28.1 bits (61), Expect(2) = 7e-08
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +2

Query: 605 SKIRS*APFVTLESILAKKKGLE 673
           SK++   PF TLE+IL++KK LE
Sbjct: 376 SKMKLAMPFFTLENILSEKKNLE 398


>ref|XP_002530377.1| protein dimerization, putative [Ricinus communis]
           gi|223530094|gb|EEF32010.1| protein dimerization,
           putative [Ricinus communis]
          Length = 698

 Score = 48.9 bits (115), Expect(2) = 8e-06
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +3

Query: 441 SASHYIEMILQKMGMMDLTKEILDKA*TIKMFIYNHAFVLKLLRNH 578
           SASH I+++L+K+G MD  K I++KA  I  FIY +  VLKL+RN+
Sbjct: 321 SASHCIKLMLEKIGAMDCIKWIIEKAKIITKFIYGNGEVLKLMRNY 366



 Score = 27.3 bits (59), Expect(2) = 8e-06
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = +2

Query: 605 SKIRS*APFVTLESILAKKKGLE 673
           S+++   PF+TLE+I+++KK LE
Sbjct: 376 SRMKFGVPFLTLENIISEKKNLE 398


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