BLASTX nr result
ID: Panax21_contig00035533
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00035533 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2... 112 4e-23 ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus] 104 7e-21 ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig... 103 1e-20 emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera] 103 1e-20 >ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1| predicted protein [Populus trichocarpa] Length = 1159 Score = 112 bits (279), Expect = 4e-23 Identities = 59/115 (51%), Positives = 76/115 (66%) Frame = +3 Query: 3 TLKRLAKSFFEMQQSEECVDDINSTLLLQYEDARYPNLLPTQLRLFYKGFDGNYDYFDGR 182 TLK LAKS F++Q++E+ D L D +P +G +G+++ FD Sbjct: 630 TLKTLAKSVFKIQRTEDSGD-------LTVSDLLHPKKA-INASASIEGLNGSHESFDEG 681 Query: 183 PSFLSIPQDFICPLSGQFFEDPVTLETGQTFESAAIAEWFNKGHKTCPLTGKTLE 347 F SIPQDF+CPL+ Q FEDPVTLETGQTFE AI +WFN+G++TCPLTGKTLE Sbjct: 682 SIFESIPQDFVCPLTRQLFEDPVTLETGQTFEREAIRKWFNQGNRTCPLTGKTLE 736 >ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|222844917|gb|EEE82464.1| predicted protein [Populus trichocarpa] Length = 760 Score = 107 bits (266), Expect = 1e-21 Identities = 58/117 (49%), Positives = 77/117 (65%), Gaps = 4/117 (3%) Frame = +3 Query: 6 LKRLAKSFFEMQQSEEC----VDDINSTLLLQYEDARYPNLLPTQLRLFYKGFDGNYDYF 173 LK LAKS FE+Q++E+ V D++ + DA +G +G++++F Sbjct: 632 LKTLAKSVFELQRTEDSGDPTVSDLSHSKKAINADASS------------EGPNGSHEHF 679 Query: 174 DGRPSFLSIPQDFICPLSGQFFEDPVTLETGQTFESAAIAEWFNKGHKTCPLTGKTL 344 D F SIP DFICPL+GQ FEDPVTLETGQTFE AI EWF++G+KTCP++GKTL Sbjct: 680 DEGSIFDSIPHDFICPLTGQLFEDPVTLETGQTFEREAIREWFDQGNKTCPVSGKTL 736 >gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus] Length = 1050 Score = 104 bits (260), Expect = 7e-21 Identities = 55/116 (47%), Positives = 72/116 (62%) Frame = +3 Query: 3 TLKRLAKSFFEMQQSEECVDDINSTLLLQYEDARYPNLLPTQLRLFYKGFDGNYDYFDGR 182 TLKRLAK F +QQ+E L + ++P+ P + DG Sbjct: 581 TLKRLAKFVFGLQQTEN---------QLHLDVTKHPDSSPIKSNA------------DGE 619 Query: 183 PSFLSIPQDFICPLSGQFFEDPVTLETGQTFESAAIAEWFNKGHKTCPLTGKTLEH 350 FL+IP+D++CPL+G FEDPVTLETGQT+E AI EWF+KG+KTCP+TGKTLE+ Sbjct: 620 HFFLNIPEDYMCPLTGHIFEDPVTLETGQTYERVAIMEWFSKGNKTCPVTGKTLEY 675 >ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis vinifera] Length = 1148 Score = 103 bits (257), Expect = 1e-20 Identities = 56/115 (48%), Positives = 71/115 (61%) Frame = +3 Query: 3 TLKRLAKSFFEMQQSEECVDDINSTLLLQYEDARYPNLLPTQLRLFYKGFDGNYDYFDGR 182 TL+ LA+S F++ S + NS + PN T + K GN YF+ Sbjct: 619 TLRTLARSVFDLHISSQS----NSEAIFD------PN--QTNMESSAKDLHGNCQYFNEG 666 Query: 183 PSFLSIPQDFICPLSGQFFEDPVTLETGQTFESAAIAEWFNKGHKTCPLTGKTLE 347 F SIPQDFICPL+G+ FEDPVT+ETGQTFE AI EWFN+G++ CP+TGK LE Sbjct: 667 SFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQGNRNCPVTGKALE 721 >emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera] Length = 1148 Score = 103 bits (257), Expect = 1e-20 Identities = 56/115 (48%), Positives = 71/115 (61%) Frame = +3 Query: 3 TLKRLAKSFFEMQQSEECVDDINSTLLLQYEDARYPNLLPTQLRLFYKGFDGNYDYFDGR 182 TL+ LA+S F++ S + NS + PN T + K GN YF+ Sbjct: 619 TLRTLARSVFDLHISSQS----NSEAIFD------PN--QTNMESSAKDLHGNCQYFNEG 666 Query: 183 PSFLSIPQDFICPLSGQFFEDPVTLETGQTFESAAIAEWFNKGHKTCPLTGKTLE 347 F SIPQDFICPL+G+ FEDPVT+ETGQTFE AI EWFN+G++ CP+TGK LE Sbjct: 667 SFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQGNRNCPVTGKALE 721