BLASTX nr result
ID: Panax21_contig00035485
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00035485 (469 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 150 8e-35 ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 135 3e-30 gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 133 1e-29 gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 132 2e-29 gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 130 1e-28 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 150 bits (380), Expect = 8e-35 Identities = 68/156 (43%), Positives = 103/156 (66%) Frame = +2 Query: 2 SKSMCFLSHVPPSHTALILNCFGFQLGEFPAKFLGVPLITSKLSLVDCRPLLEKITTKIS 181 +KS FLS V + I++ GF+ GE P K+LGVPL++S+L + C+ L+++IT+K+ Sbjct: 26 NKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVR 85 Query: 182 SWTSKFLSYVGRMQLIKSVIFASQAYWSAHFILPASTMKELQTSLSRFLWKGPSMGKHGS 361 WT + LSY GR+QLI SV+F+ Q YW++ F+LP +K ++ + FLW G M G+ Sbjct: 86 HWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGA 145 Query: 362 KVAWAKISLPFAEGRLAIKSLTNWNKSLIMMHLWKV 469 KVAW ++ LP EG L IKS+ WNK ++ H+W + Sbjct: 146 KVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNL 181 >ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis sativus] Length = 382 Score = 135 bits (340), Expect = 3e-30 Identities = 60/154 (38%), Positives = 100/154 (64%) Frame = +2 Query: 2 SKSMCFLSHVPPSHTALILNCFGFQLGEFPAKFLGVPLITSKLSLVDCRPLLEKITTKIS 181 +KS FL V S + + GF +G P ++LG+PL+ +L DC PL+++IT++I Sbjct: 6 AKSSIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIR 65 Query: 182 SWTSKFLSYVGRMQLIKSVIFASQAYWSAHFILPASTMKELQTSLSRFLWKGPSMGKHGS 361 SW+++ LS+ GR+QL++SV+ + Q YW++ F+LP +++ L +LW+G G+ G+ Sbjct: 66 SWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGA 125 Query: 362 KVAWAKISLPFAEGRLAIKSLTNWNKSLIMMHLW 463 KVAW ++ LPF EG LAI+ ++WN + + LW Sbjct: 126 KVAWDEVCLPFDEGGLAIRDGSSWNIASTLKILW 159 >gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana] gi|20197043|gb|AAM14892.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 1412 Score = 133 bits (335), Expect = 1e-29 Identities = 62/155 (40%), Positives = 97/155 (62%) Frame = +2 Query: 5 KSMCFLSHVPPSHTALILNCFGFQLGEFPAKFLGVPLITSKLSLVDCRPLLEKITTKISS 184 KS F++ + A IL F F G P ++LG+PL+T +++L DC PLLEKI ++ISS Sbjct: 995 KSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISS 1054 Query: 185 WTSKFLSYVGRMQLIKSVIFASQAYWSAHFILPASTMKELQTSLSRFLWKGPSMGKHGSK 364 W ++FLSY GR+QL+ SVI + +W + F LP + ++E++ + FLW G + H +K Sbjct: 1055 WKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAK 1114 Query: 365 VAWAKISLPFAEGRLAIKSLTNWNKSLIMMHLWKV 469 VAW + P +EG L ++SL + NK +W++ Sbjct: 1115 VAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRL 1149 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 132 bits (333), Expect = 2e-29 Identities = 60/135 (44%), Positives = 88/135 (65%) Frame = +2 Query: 65 FGFQLGEFPAKFLGVPLITSKLSLVDCRPLLEKITTKISSWTSKFLSYVGRMQLIKSVIF 244 +GF +G P ++LG+PL+ KL + + PLLEKIT + SW +K LS+ GR+QLI SVIF Sbjct: 753 YGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIF 812 Query: 245 ASQAYWSAHFILPASTMKELQTSLSRFLWKGPSMGKHGSKVAWAKISLPFAEGRLAIKSL 424 S +W + F+LP +K +++ SRFLW G G KV+WA + LP +EG L ++ L Sbjct: 813 GSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRL 872 Query: 425 TNWNKSLIMMHLWKV 469 WNK+L M +W++ Sbjct: 873 LEWNKTLSMRLIWRL 887 >gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1352 Score = 130 bits (326), Expect = 1e-28 Identities = 59/155 (38%), Positives = 99/155 (63%) Frame = +2 Query: 5 KSMCFLSHVPPSHTALILNCFGFQLGEFPAKFLGVPLITSKLSLVDCRPLLEKITTKISS 184 KS F++ + P+ IL F F+LG P K+LG+PL+T +++ D PL+EKI +I+S Sbjct: 887 KSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITS 946 Query: 185 WTSKFLSYVGRMQLIKSVIFASQAYWSAHFILPASTMKELQTSLSRFLWKGPSMGKHGSK 364 WT++FLS+ GR+QLIKSV+ + +W + F LP + ++E++ S FLW GP + +K Sbjct: 947 WTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAK 1006 Query: 365 VAWAKISLPFAEGRLAIKSLTNWNKSLIMMHLWKV 469 +AW+++ EG L +K L N+ ++ +W++ Sbjct: 1007 IAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRI 1041