BLASTX nr result

ID: Panax21_contig00035484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035484
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...    95   2e-17
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...    95   2e-17
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355...    90   4e-16
emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]    89   7e-16
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]    89   1e-15

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = +2

Query: 221 NAAGSQQNPMQDFINMMVEAMRNQAQPAGNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQ 400
           N  G QQ   Q  + ++    ++ A   G           +F+ + PP F GTA+P+EA+
Sbjct: 42  NILGKQQETQQRQMEILERITKSDANRNG---------LGEFQKLKPPTFSGTANPLEAE 92

Query: 401 TWVKEIEKAFVIARVAEEQKTIFATYLMKGEANYWWEANQNKAGTGI-VTWEEFKKLFFE 577
            W+  +EK+F      +++K I+ATY+++  A  WW+A++      I +TWE FK+ F++
Sbjct: 93  EWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYK 152

Query: 578 NYFPESTQARMEIKFLELR 634
            YFPES +   E +FLEL+
Sbjct: 153 KYFPESVKRMKEKEFLELK 171


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = +2

Query: 221 NAAGSQQNPMQDFINMMVEAMRNQAQPAGNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQ 400
           N  G QQ   Q  + ++    ++ A   G           +F+ + PP F GTA+P+EA+
Sbjct: 130 NILGKQQETQQRQMEILERITKSDANRNG---------LGEFQKLKPPTFSGTANPLEAE 180

Query: 401 TWVKEIEKAFVIARVAEEQKTIFATYLMKGEANYWWEANQNKAGTGI-VTWEEFKKLFFE 577
            W+  +EK+F      +++K I+ATY+++  A  WW+A++      I +TWE FK+ F++
Sbjct: 181 EWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYK 240

Query: 578 NYFPESTQARMEIKFLELR 634
            YFPES +   E +FLEL+
Sbjct: 241 KYFPESVKRMKEKEFLELK 259


>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1|
           Pol polyprotein [Medicago truncatula]
          Length = 745

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
 Frame = +2

Query: 269 MVEAMRNQAQPAGNQ------AGTQIVNFKDFKAVGPPEFRGTADPIEAQTWVKEIEKAF 430
           +  A++  AQ  G Q      A  +    + F    PP F+G  DP  AQTW+KEIE+ F
Sbjct: 9   LAAALQAVAQAVGQQPNVNAGANAEARMLETFMKKNPPTFKGRCDPDGAQTWLKEIERIF 68

Query: 431 VIARVAEEQKTIFATYLMKGEANYWWEANQNKAGT--GIVTWEEFKKLFFENYFPESTQA 604
            + +  E+QK  F T+ +  EA+ WW A     G    +VTW  F++ F   YFPE  + 
Sbjct: 69  RVMQCTEDQKVRFGTHQLAEEADDWWVALLPTLGQEGAVVTWAVFRREFLRRYFPEDVRG 128

Query: 605 RMEIKFLELR 634
           + EI+FLEL+
Sbjct: 129 KKEIEFLELK 138


>emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]
          Length = 360

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = +2

Query: 305 GNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQTWVKEIEKAFVIARVAEEQKTIFATYLM 484
           G  + ++  +F DFK +GPP F G  DP EA+ W+ ++EK F +   +EEQK  +A +++
Sbjct: 90  GQSSSSRGSSFDDFKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFML 149

Query: 485 KGEANYWWEANQN-KAGTGIVTWEEFKKLFFENYFPESTQARMEIKFLEL 631
             E ++WW   +      G +TW +F++ F++ YFP+S + +   +F+ L
Sbjct: 150 DKETDHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRRQKVGEFIRL 199


>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = +2

Query: 305 GNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQTWVKEIEKAFVIARVAEEQKTIFATYLM 484
           G  + ++  +F DFK +GPP F G  DP EA+ W+ ++EK F +   +EEQK  +A +++
Sbjct: 543 GQSSSSRGSSFDDFKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFML 602

Query: 485 KGEANYWWEANQN-KAGTGIVTWEEFKKLFFENYFPESTQARMEIKFLEL 631
             EA +WW   +      G +TW +F++ F++ YFP+S + +   +F+ L
Sbjct: 603 DKEAYHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRWQKVGEFIRL 652


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