BLASTX nr result
ID: Panax21_contig00035484
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00035484 (741 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy... 95 2e-17 ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g... 95 2e-17 ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355... 90 4e-16 emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera] 89 7e-16 emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera] 89 1e-15 >gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa] gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica Group] gi|31431495|gb|AAP53268.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1230 Score = 94.7 bits (234), Expect = 2e-17 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Frame = +2 Query: 221 NAAGSQQNPMQDFINMMVEAMRNQAQPAGNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQ 400 N G QQ Q + ++ ++ A G +F+ + PP F GTA+P+EA+ Sbjct: 42 NILGKQQETQQRQMEILERITKSDANRNG---------LGEFQKLKPPTFSGTANPLEAE 92 Query: 401 TWVKEIEKAFVIARVAEEQKTIFATYLMKGEANYWWEANQNKAGTGI-VTWEEFKKLFFE 577 W+ +EK+F +++K I+ATY+++ A WW+A++ I +TWE FK+ F++ Sbjct: 93 EWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYK 152 Query: 578 NYFPESTQARMEIKFLELR 634 YFPES + E +FLEL+ Sbjct: 153 KYFPESVKRMKEKEFLELK 171 >ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa Japonica Group] Length = 443 Score = 94.7 bits (234), Expect = 2e-17 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Frame = +2 Query: 221 NAAGSQQNPMQDFINMMVEAMRNQAQPAGNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQ 400 N G QQ Q + ++ ++ A G +F+ + PP F GTA+P+EA+ Sbjct: 130 NILGKQQETQQRQMEILERITKSDANRNG---------LGEFQKLKPPTFSGTANPLEAE 180 Query: 401 TWVKEIEKAFVIARVAEEQKTIFATYLMKGEANYWWEANQNKAGTGI-VTWEEFKKLFFE 577 W+ +EK+F +++K I+ATY+++ A WW+A++ I +TWE FK+ F++ Sbjct: 181 EWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYK 240 Query: 578 NYFPESTQARMEIKFLELR 634 YFPES + E +FLEL+ Sbjct: 241 KYFPESVKRMKEKEFLELK 259 >ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1| Pol polyprotein [Medicago truncatula] Length = 745 Score = 90.1 bits (222), Expect = 4e-16 Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 8/130 (6%) Frame = +2 Query: 269 MVEAMRNQAQPAGNQ------AGTQIVNFKDFKAVGPPEFRGTADPIEAQTWVKEIEKAF 430 + A++ AQ G Q A + + F PP F+G DP AQTW+KEIE+ F Sbjct: 9 LAAALQAVAQAVGQQPNVNAGANAEARMLETFMKKNPPTFKGRCDPDGAQTWLKEIERIF 68 Query: 431 VIARVAEEQKTIFATYLMKGEANYWWEANQNKAGT--GIVTWEEFKKLFFENYFPESTQA 604 + + E+QK F T+ + EA+ WW A G +VTW F++ F YFPE + Sbjct: 69 RVMQCTEDQKVRFGTHQLAEEADDWWVALLPTLGQEGAVVTWAVFRREFLRRYFPEDVRG 128 Query: 605 RMEIKFLELR 634 + EI+FLEL+ Sbjct: 129 KKEIEFLELK 138 >emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera] Length = 360 Score = 89.4 bits (220), Expect = 7e-16 Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Frame = +2 Query: 305 GNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQTWVKEIEKAFVIARVAEEQKTIFATYLM 484 G + ++ +F DFK +GPP F G DP EA+ W+ ++EK F + +EEQK +A +++ Sbjct: 90 GQSSSSRGSSFDDFKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFML 149 Query: 485 KGEANYWWEANQN-KAGTGIVTWEEFKKLFFENYFPESTQARMEIKFLEL 631 E ++WW + G +TW +F++ F++ YFP+S + + +F+ L Sbjct: 150 DKETDHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRRQKVGEFIRL 199 >emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera] Length = 1797 Score = 89.0 bits (219), Expect = 1e-15 Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Frame = +2 Query: 305 GNQAGTQIVNFKDFKAVGPPEFRGTADPIEAQTWVKEIEKAFVIARVAEEQKTIFATYLM 484 G + ++ +F DFK +GPP F G DP EA+ W+ ++EK F + +EEQK +A +++ Sbjct: 543 GQSSSSRGSSFDDFKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFML 602 Query: 485 KGEANYWWEANQN-KAGTGIVTWEEFKKLFFENYFPESTQARMEIKFLEL 631 EA +WW + G +TW +F++ F++ YFP+S + + +F+ L Sbjct: 603 DKEAYHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRWQKVGEFIRL 652