BLASTX nr result

ID: Panax21_contig00035482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035482
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinif...   298   9e-79
gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]          285   1e-74
ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicu...   284   2e-74
ref|XP_002275557.1| PREDICTED: putative expansin-B2 [Vitis vinif...   239   4e-61
gb|AAZ08315.1| putative beta-expansin [Eucalyptus globulus]           238   1e-60

>ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297743578|emb|CBI36445.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  298 bits (763), Expect = 9e-79
 Identities = 146/189 (77%), Positives = 158/189 (83%), Gaps = 2/189 (1%)
 Frame = +1

Query: 1   GACYQVKCTK--HPSCSGKPARVVITDFCPGGVCASDRAHFDLSGTAFGAMAIPGQEKHL 174
           GACYQVKCTK  HPSCSG+P RVVITDFCPGG CAS  AHFDLSGTAFGAMAIPGQE+ L
Sbjct: 98  GACYQVKCTKRMHPSCSGRPVRVVITDFCPGGPCASQSAHFDLSGTAFGAMAIPGQEEKL 157

Query: 175 RDAGILQIRFARVACDYAGKTIAFHVDQGSNPNYIAFVVEFEEGDGDLAGVGLKETTSKS 354
           R+ G+L+IR+ARVACDY+GKTIAFHVD G+NPN  + +VEFEEGDGDLAGV LKET   S
Sbjct: 158 RNVGVLEIRYARVACDYSGKTIAFHVDLGANPNSFSVLVEFEEGDGDLAGVALKETLKGS 217

Query: 355 STSPHRLSDVWRGMQQSWGAVWKLDAGGELKPPLSIRLTSQYSEQTLVAKNVIPVGWKPG 534
                     WR MQQSWGAVWKLDAG ELKPP SI+LTSQYS QTLVAKNVIP GWKPG
Sbjct: 218 GK--------WRAMQQSWGAVWKLDAGYELKPPFSIQLTSQYSGQTLVAKNVIPDGWKPG 269

Query: 535 ATYRSLVNY 561
           +TYRSLVNY
Sbjct: 270 STYRSLVNY 278


>gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]
          Length = 279

 Score =  285 bits (728), Expect = 1e-74
 Identities = 140/189 (74%), Positives = 152/189 (80%), Gaps = 2/189 (1%)
 Frame = +1

Query: 1   GACYQVKCTK--HPSCSGKPARVVITDFCPGGVCASDRAHFDLSGTAFGAMAIPGQEKHL 174
           GACYQVKCTK  H SCSGK  RVVITDFCPGG C +  AHFDLSGTAFG+MAIPGQE+ L
Sbjct: 94  GACYQVKCTKKMHGSCSGKGVRVVITDFCPGGPCVAQSAHFDLSGTAFGSMAIPGQEQKL 153

Query: 175 RDAGILQIRFARVACDYAGKTIAFHVDQGSNPNYIAFVVEFEEGDGDLAGVGLKETTSKS 354
           RDAG+LQIR+ARVACDY+ K I FHVDQGSN  Y A V+EFEEGDGDLA V LKE  S  
Sbjct: 154 RDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEEGDGDLAKVELKEKISSI 213

Query: 355 STSPHRLSDVWRGMQQSWGAVWKLDAGGELKPPLSIRLTSQYSEQTLVAKNVIPVGWKPG 534
           +      +  WR MQQSWGAVWKLDAG EL PP SIRLTSQYS+Q L+AKNVIP GW+PG
Sbjct: 214 TK-----NSKWRQMQQSWGAVWKLDAGSELHPPFSIRLTSQYSDQILIAKNVIPTGWQPG 268

Query: 535 ATYRSLVNY 561
           ATYRSLVNY
Sbjct: 269 ATYRSLVNY 277


>ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum]
           gi|81367673|gb|ABB71677.1| beta expansin precursor
           [Solanum lycopersicum]
          Length = 285

 Score =  284 bits (726), Expect = 2e-74
 Identities = 140/190 (73%), Positives = 153/190 (80%), Gaps = 3/190 (1%)
 Frame = +1

Query: 1   GACYQVKCTK--HPSCSGKPARVVITDFCPGGVCASDRAHFDLSGTAFGAMAIPGQEKHL 174
           GACYQVKCTK  H SCSGK  RVVITDFCPGG C +  AHFDLSGTAFGAMAIPGQE+ L
Sbjct: 94  GACYQVKCTKKMHRSCSGKGVRVVITDFCPGGPCVAQSAHFDLSGTAFGAMAIPGQEQKL 153

Query: 175 RDAGILQIRFARVACDYAGKTIAFHVDQGSNPNYIAFVVEFEEGDGDLAGVGLKETTSKS 354
           RDAG+LQIR+ARVACDY+ K I FHVDQGSN  Y A V+EFE+GDGDLA V LKE  S S
Sbjct: 154 RDAGVLQIRYARVACDYSRKNIVFHVDQGSNSEYFAVVIEFEQGDGDLAKVELKEKRSSS 213

Query: 355 STSPHRLSDV-WRGMQQSWGAVWKLDAGGELKPPLSIRLTSQYSEQTLVAKNVIPVGWKP 531
             S    ++  WR MQQSWGAVWKLDAG +L PP SIRLTSQYS+Q L+A NVIP GW+P
Sbjct: 214 IISRGNKNNYKWRQMQQSWGAVWKLDAGSKLHPPFSIRLTSQYSDQILIANNVIPTGWQP 273

Query: 532 GATYRSLVNY 561
           GATYRSLVNY
Sbjct: 274 GATYRSLVNY 283


>ref|XP_002275557.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297734541|emb|CBI16592.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score =  239 bits (611), Expect = 4e-61
 Identities = 116/187 (62%), Positives = 138/187 (73%)
 Frame = +1

Query: 1   GACYQVKCTKHPSCSGKPARVVITDFCPGGVCASDRAHFDLSGTAFGAMAIPGQEKHLRD 180
           GACYQVKCT + +CSG P  V ITD CPG  C S+  HFDLSGTAFGAMA PGQ   LR+
Sbjct: 96  GACYQVKCTGNEACSGSPVTVTITDECPG--CVSESTHFDLSGTAFGAMATPGQADQLRN 153

Query: 181 AGILQIRFARVACDYAGKTIAFHVDQGSNPNYIAFVVEFEEGDGDLAGVGLKETTSKSST 360
           AGILQI++ RV C+Y G ++AFHVD GSNPNY A ++E+E+GDG+LAGV L++    +S 
Sbjct: 154 AGILQIQYRRVECEYPGASVAFHVDSGSNPNYFASLIEYEDGDGELAGVDLQQALHSNS- 212

Query: 361 SPHRLSDVWRGMQQSWGAVWKLDAGGELKPPLSIRLTSQYSEQTLVAKNVIPVGWKPGAT 540
                   W  MQQSWGAVWKLD+G  L+ P SIRLT+  S  TLVAKNVIP GW+PG T
Sbjct: 213 --------WVPMQQSWGAVWKLDSGSGLRAPFSIRLTALESGNTLVAKNVIPAGWQPGKT 264

Query: 541 YRSLVNY 561
           YRSLVN+
Sbjct: 265 YRSLVNF 271


>gb|AAZ08315.1| putative beta-expansin [Eucalyptus globulus]
          Length = 210

 Score =  238 bits (607), Expect = 1e-60
 Identities = 111/187 (59%), Positives = 138/187 (73%)
 Frame = +1

Query: 1   GACYQVKCTKHPSCSGKPARVVITDFCPGGVCASDRAHFDLSGTAFGAMAIPGQEKHLRD 180
           GACYQVKCT++ +CSG P  VVITD CPGG C ++ AHFDLSGTAFGAMA  G+   LR+
Sbjct: 31  GACYQVKCTENAACSGNPVTVVITDECPGGPCVAESAHFDLSGTAFGAMASSGKADELRN 90

Query: 181 AGILQIRFARVACDYAGKTIAFHVDQGSNPNYIAFVVEFEEGDGDLAGVGLKETTSKSST 360
           AG+LQI++ +V C++ G  +AFHVD GSNPNY A ++E+E+GDG+L  V LK+       
Sbjct: 91  AGVLQIQYQKVKCNFPGAKVAFHVDSGSNPNYFAALIEYEDGDGELGAVNLKQALD---- 146

Query: 361 SPHRLSDVWRGMQQSWGAVWKLDAGGELKPPLSIRLTSQYSEQTLVAKNVIPVGWKPGAT 540
                SD W  MQQSWGAVWKLD  G+L+ P SI+LTS  S +TLVA NVIP GW+PG T
Sbjct: 147 -----SDSWLPMQQSWGAVWKLDGAGQLRAPFSIKLTSLDSGKTLVANNVIPAGWQPGQT 201

Query: 541 YRSLVNY 561
           YRS+VN+
Sbjct: 202 YRSVVNF 208


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