BLASTX nr result
ID: Panax21_contig00035471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00035471
(611 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 148 1e-35
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 144 6e-35
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 150 1e-34
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 148 5e-34
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 145 7e-34
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 148 bits (373), Expect(2) = 1e-35
Identities = 73/177 (41%), Positives = 107/177 (60%)
Frame = -1
Query: 608 KTKECKLTHLLFADDIIIFCHASLPSIAIINSCILSFSLYSGLIPNSHKSHCFLSNSNPS 429
K + KLTHL+FADD+++F A SI+ I + SFS SGL + KS +
Sbjct: 680 KCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHE 739
Query: 428 TSRDIISLLGFPLGTLPVKFLGVPLLPKKISFKDYIPLIQRITSRASSWTSKVLSYSGRL 249
+ + + P+G+LP ++LGVPL KK++F PLI +IT+RA W + +LSY+GRL
Sbjct: 740 EAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRL 799
Query: 248 QLIKSILFSIQVYWSSHFLLPKAILKELQSILTRFLWKGATLDKYGAKVAWSIISFP 78
QL+K+IL+S+Q YW F LPK ++K +++ +FLW G Y A VAW + P
Sbjct: 800 QLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQP 856
Score = 27.3 bits (59), Expect(2) = 1e-35
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 79 PFSEGGLGIKNLVDWNFACIL 17
P S GGL + N+V WN A IL
Sbjct: 856 PKSTGGLNVTNMVLWNKAAIL 876
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 144 bits (364), Expect(2) = 6e-35
Identities = 69/171 (40%), Positives = 111/171 (64%)
Frame = -1
Query: 590 LTHLLFADDIIIFCHASLPSIAIINSCILSFSLYSGLIPNSHKSHCFLSNSNPSTSRDII 411
LTHL FADDI++F S S+ + + F+ +SGL + KS F+++ + T I+
Sbjct: 953 LTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASIL 1012
Query: 410 SLLGFPLGTLPVKFLGVPLLPKKISFKDYIPLIQRITSRASSWTSKVLSYSGRLQLIKSI 231
+ F G+LPV++LG+PL+ K+++ D +PL+++I SR SSW ++ LSY+GRLQL+ S+
Sbjct: 1013 ARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSV 1072
Query: 230 LFSIQVYWSSHFLLPKAILKELQSILTRFLWKGATLDKYGAKVAWSIISFP 78
+ S+ +W S F LP+A ++E++ I FLW G L+ + AKVAW + P
Sbjct: 1073 ISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKP 1123
Score = 28.5 bits (62), Expect(2) = 6e-35
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 79 PFSEGGLGIKNLVDWNFAC 23
P SEGGLG+++LVD N C
Sbjct: 1123 PKSEGGLGLRSLVDANKIC 1141
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 150 bits (380), Expect = 1e-34
Identities = 75/172 (43%), Positives = 112/172 (65%)
Frame = -1
Query: 608 KTKECKLTHLLFADDIIIFCHASLPSIAIINSCILSFSLYSGLIPNSHKSHCFLSNSNPS 429
+ + LTHL FADDI++F + SI + F+ S L + KS F++ +P+
Sbjct: 839 RCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPN 898
Query: 428 TSRDIISLLGFPLGTLPVKFLGVPLLPKKISFKDYIPLIQRITSRASSWTSKVLSYSGRL 249
I+ F LGTLPVK+LG+PLL K+++ DY+PL+++I +R +SWT++ LS++GRL
Sbjct: 899 AKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRL 958
Query: 248 QLIKSILFSIQVYWSSHFLLPKAILKELQSILTRFLWKGATLDKYGAKVAWS 93
QLIKS+L SI +W S F LPKA L+E++ + + FLW G L+ AK+AWS
Sbjct: 959 QLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWS 1010
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 148 bits (374), Expect(2) = 5e-34
Identities = 72/177 (40%), Positives = 111/177 (62%)
Frame = -1
Query: 608 KTKECKLTHLLFADDIIIFCHASLPSIAIINSCILSFSLYSGLIPNSHKSHCFLSNSNPS 429
K + +THL+FADD+++FC A S+ +N FS SGL + KS+ + +
Sbjct: 677 KCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDE 736
Query: 428 TSRDIISLLGFPLGTLPVKFLGVPLLPKKISFKDYIPLIQRITSRASSWTSKVLSYSGRL 249
T+R++ + LG LP ++LGVPL KK+++ PL++ IT+RA +W +K+LSY+GRL
Sbjct: 737 TARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRL 796
Query: 248 QLIKSILFSIQVYWSSHFLLPKAILKELQSILTRFLWKGATLDKYGAKVAWSIISFP 78
QLIKSIL S+Q YW+ F L K +++ ++ + +FLW G T + A VAW+ I P
Sbjct: 797 QLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRP 853
Score = 21.6 bits (44), Expect(2) = 5e-34
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 79 PFSEGGLGIKNLVDWNFACIL 17
P S GG + N+ WN A +L
Sbjct: 853 PKSRGGWNVINMKYWNRAAML 873
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 145 bits (366), Expect(2) = 7e-34
Identities = 71/171 (41%), Positives = 110/171 (64%)
Frame = -1
Query: 590 LTHLLFADDIIIFCHASLPSIAIINSCILSFSLYSGLIPNSHKSHCFLSNSNPSTSRDII 411
+THL FADD+++F + SIA I + + F SGL N K+ L N + +R +
Sbjct: 692 ITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLA 751
Query: 410 SLLGFPLGTLPVKFLGVPLLPKKISFKDYIPLIQRITSRASSWTSKVLSYSGRLQLIKSI 231
LG G+LPV++LGVPL+ +K+ +DY PL+ RI SR +SWT++ LS++GRLQL+KS+
Sbjct: 752 DNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSV 811
Query: 230 LFSIQVYWSSHFLLPKAILKELQSILTRFLWKGATLDKYGAKVAWSIISFP 78
++S +W+S F+ P L++L+ + FLW GA GAK++W+I+ P
Sbjct: 812 IYSTINFWASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSP 862
Score = 24.3 bits (51), Expect(2) = 7e-34
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 79 PFSEGGLGIKNLVDWN 32
P GGLG+K L WN
Sbjct: 862 PKEAGGLGLKRLSSWN 877