BLASTX nr result

ID: Panax21_contig00035450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035450
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_002531465.1| conserved hypothetical protein [Ricinus comm...    90   5e-16
ref|XP_002327059.1| predicted protein [Populus trichocarpa] gi|2...    68   3e-09
ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatu...    65   2e-08

>ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|222833983|gb|EEE72460.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 81/238 (34%), Positives = 110/238 (46%), Gaps = 22/238 (9%)
 Frame = +1

Query: 22  HRKSPLMKSTSSVTNDDCFPQREFKRSIRSVPMELNGSDRGEDPRNRANSGEGAEWWTRT 201
           +R+S  +K  SS  +D+   +RE KRS  + P +LN   RG                   
Sbjct: 349 NRESSSVKPISSAVHDEVLLERELKRSFTTEPKDLN---RG------------------- 386

Query: 202 SSDGSL-MGKSVRTLGQNEAVQGAAKTKAFSEDFVYVKEEKRSNEVESTFIEKKGNLD-- 372
              G+L M KSVRT+  N+ +  A + K F +D +  KEEKR  EVE+   E+ G     
Sbjct: 387 ---GNLPMPKSVRTIRSNDLLGEARREKEF-DDRINSKEEKRLKEVEARGKERAGRKTVR 442

Query: 373 --------KKITRDSAPFVSKQNSSELPXXXXXXFLEQVAVXXXXXXXXXXXXXXXXISR 528
                   +K  R+S  F  +   +E        F+E++ V                 S 
Sbjct: 443 FDQSSFQTEKQNRESVSFTPQPTFTEFHEEENEEFVEKLVVESDEGSETEEEENIAGSSF 502

Query: 529 NDQRVAH-----------NDGGPDVDKKADEFIAKFREQIRLQRIASIRRSTGQLPRN 669
                A            +DGGPDVDKKADEFIAKFREQIRLQRI SI++S+ Q+ RN
Sbjct: 503 ASSTAASPEKDAAAASIASDGGPDVDKKADEFIAKFREQIRLQRIESIKKSSAQIRRN 560


>ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|222841726|gb|EEE79273.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 79/251 (31%), Positives = 111/251 (44%), Gaps = 32/251 (12%)
 Frame = +1

Query: 22   HRKSPLMKSTSSVTNDDCFPQREFKRSIRSVPMELNGSDRGEDPRNRANSGEGAEWWTRT 201
            +RKS  MK + S  +D+ F +RE KRS  + P +LN   RG                   
Sbjct: 352  NRKSSSMKPSFSAIHDEAFLERELKRSFTTEPKDLN---RG------------------- 389

Query: 202  SSDGSL-MGKSVRTLGQNEAVQGAAKTKAFSEDFVYVKEEKRSNEVESTFIEKKGNLD-- 372
               G+L M KSV+T   N+ +  A K K F +D +    EKR  +VE++ +E+ G     
Sbjct: 390  ---GNLTMPKSVKTFRSNDLLGEARKEKEF-DDRINSNAEKRLKQVEASAMERIGRKTVG 445

Query: 373  --------KKITRDSAPFVSKQNSSELPXXXXXXFLEQVAVXXXXXXXXXXXXXXXXISR 528
                     +  R+   F  +    E P      ++E++A+                   
Sbjct: 446  FDQSSFKTDRQNRERVTFTPQSTFMEFPEEEEEEYVEKLAMESDEESGTEEEGGDED--- 502

Query: 529  NDQRVAHN---------------------DGGPDVDKKADEFIAKFREQIRLQRIASIRR 645
             D+ +A N                     DGGPDVDKKADEFIAKFREQIRLQRI SI++
Sbjct: 503  EDEDIAGNSFASGIAARPKKEAAAASSASDGGPDVDKKADEFIAKFREQIRLQRIESIKK 562

Query: 646  STGQLPRNSVR 678
            S+ Q+ R   R
Sbjct: 563  SSAQIRRKPSR 573


>ref|XP_002531465.1| conserved hypothetical protein [Ricinus communis]
           gi|223528919|gb|EEF30915.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 78/242 (32%), Positives = 102/242 (42%), Gaps = 24/242 (9%)
 Frame = +1

Query: 25  RKSPLMKSTSSVTNDDCFPQREFKRSIRSVPMELNGSDRGEDPRNRANSGEGAEWWTRTS 204
           RKS  MK  SS   +     R+FKRS  S P E+N                    W   S
Sbjct: 360 RKSRSMKPGSSEIGNRDSVGRDFKRSFTSEPKEMN--------------------WVGNS 399

Query: 205 SDGSLMGKSVRTLGQNEAVQGAAKTKAFSEDFVYVKEEKRSNEVESTFIEKKGNLDKKIT 384
           S    M KS+RT   N++   A+K K F +D +  K EK+ ++              K  
Sbjct: 400 S----MKKSIRTTRSNDSFAMASKEKEF-DDVINSKTEKKFDQAAF-----------KTN 443

Query: 385 RDSAPFVSKQNSSELPXXXXXXFLEQVAVXXXXXXXXXXXXXXXXISRNDQR---VAHN- 552
           RD   F+ +    E P      F+E++ +                   ND     +A N 
Sbjct: 444 RDRVTFMPQPTYMEYPKEEKEEFVEKLVLESDEDLEETEDDLDGAADDNDNDNDDIAGNS 503

Query: 553 --------------------DGGPDVDKKADEFIAKFREQIRLQRIASIRRSTGQLPRNS 672
                               DGGPDVDKKADEFIAKFREQIRLQRI SI++S+GQ+ R +
Sbjct: 504 FVASTSASTNNEEPNSGNVSDGGPDVDKKADEFIAKFREQIRLQRIESIKKSSGQIHRKA 563

Query: 673 VR 678
            R
Sbjct: 564 SR 565


>ref|XP_002327059.1| predicted protein [Populus trichocarpa] gi|222835374|gb|EEE73809.1|
            predicted protein [Populus trichocarpa]
          Length = 756

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 66/224 (29%), Positives = 91/224 (40%), Gaps = 18/224 (8%)
 Frame = +1

Query: 40   MKSTSSVTNDDCFPQREFKR-SIRSVPMELNGSDRGEDPRNRANSGEGAEWWTRTSSD-- 210
            +K      N+D    RE    S+RSV      + R ED      +G+G+    +  +   
Sbjct: 529  LKDLKGKRNEDTMGSREAGHGSLRSVQKP---ATRNEDTMGSTEAGQGSLRSVQKPATPV 585

Query: 211  --GSLMGKSVRTLGQNEAVQGAAKTKAFSEDFVYVKEEKRSNEVESTFIEKKG------- 363
               SL GKSVRT+  +       K    S + +  K  K  NE ++  + K         
Sbjct: 586  KISSLKGKSVRTIRASRYAAETIKAGEMSRNHIDDKVGKICNEAQTVNMGKDEMERGPDN 645

Query: 364  ---NLDKKITRDSAPFVSKQNSSELPXXXXXXFLEQVAVXXXXXXXXXXXXXXXXISRND 534
                 DKK   D+   +SK   S+          E V V                   + 
Sbjct: 646  MLIGADKK-NSDAQHHMSKPTLSKYKKKENEVISESVTVESTEDSESENDISRVSSDEDS 704

Query: 535  QRVAHNDGGP---DVDKKADEFIAKFREQIRLQRIASIRRSTGQ 657
                +ND G    +VDKKA EFIAKFREQIRLQ++ASI RS G+
Sbjct: 705  APAIYNDAGDYSSEVDKKAGEFIAKFREQIRLQKVASIERSKGK 748


>ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatula]
           gi|355509726|gb|AES90868.1| Glycoprotein-like protein
           [Medicago truncatula]
          Length = 483

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +1

Query: 550 NDGGPDVDKKADEFIAKFREQIRLQRIASIRRSTGQLPRNSVR 678
           +D GPDVDKKADEFIAKFREQIRLQRI SI+RST ++ RNS R
Sbjct: 442 SDEGPDVDKKADEFIAKFREQIRLQRIESIKRST-RVARNSSR 483


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