BLASTX nr result

ID: Panax21_contig00035448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035448
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530750.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|NP_001152208.1| zinc finger C-x8-C-x5-C-x3-H type family pro...    58   9e-07
ref|XP_002448705.1| hypothetical protein SORBIDRAFT_06g031850 [S...    57   1e-06
ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002310301.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002530750.1| conserved hypothetical protein [Ricinus communis]
           gi|223529714|gb|EEF31656.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 497

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/56 (58%), Positives = 37/56 (66%)
 Frame = -2

Query: 445 PKKQKPCMYFNGPRGCRNGSRCQYLHIMSDRPTPSGVKEPPPRAKRMKLDGETGGR 278
           PK QKPCMY+  P+GCRNGS C Y H +S +    G  E  P AKRMKLDGE  GR
Sbjct: 442 PKFQKPCMYYRSPKGCRNGSNCPYQHDLSFQFQTGGNLE-APYAKRMKLDGEITGR 496


>ref|NP_001152208.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
           gi|195653857|gb|ACG46396.1| zinc finger C-x8-C-x5-C-x3-H
           type family protein [Zea mays]
          Length = 459

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
 Frame = -2

Query: 460 SSASMPKKQ------KPCMYFNGPRGCRNGSRCQYLHIMSDRPTPSGVKEPPPRAKRMKL 299
           SS +MP +       KPC YFN  RGCRNG++C +LH +S     +  KE P   KR+KL
Sbjct: 397 SSGTMPARDTKQRPMKPCAYFNSARGCRNGAKCTFLHDVS-----AARKEQPKGPKRIKL 451

Query: 298 DGETGGR 278
           D    GR
Sbjct: 452 DSRIAGR 458


>ref|XP_002448705.1| hypothetical protein SORBIDRAFT_06g031850 [Sorghum bicolor]
           gi|241939888|gb|EES13033.1| hypothetical protein
           SORBIDRAFT_06g031850 [Sorghum bicolor]
          Length = 450

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/52 (51%), Positives = 32/52 (61%)
 Frame = -2

Query: 433 KPCMYFNGPRGCRNGSRCQYLHIMSDRPTPSGVKEPPPRAKRMKLDGETGGR 278
           KPC YFN  RGCRNG+ C +LH MS     +  KE P  +KR+KLD    GR
Sbjct: 403 KPCAYFNSARGCRNGANCTFLHDMS-----AARKEQPKGSKRIKLDSRIAGR 449


>ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|222856360|gb|EEE93907.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/57 (50%), Positives = 34/57 (59%)
 Frame = -2

Query: 460 SSASMPKKQKPCMYFNGPRGCRNGSRCQYLHIMSDRPTPSGVKEPPPRAKRMKLDGE 290
           S  S  K  KPC+YFN PRGCRNG+ C Y H  S +   S + E    AKRMK+D E
Sbjct: 343 SRESKHKIMKPCIYFNTPRGCRNGANCAYQHDSSSQKKGSSIAE-VQSAKRMKMDRE 398


>ref|XP_002310301.1| predicted protein [Populus trichocarpa] gi|222853204|gb|EEE90751.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/57 (52%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 445 PKKQKPCMYFNGPRGCRNGSRCQYLHIMSDRPTPSGVKEPPPRAKRMKLDGE-TGGR 278
           PK QKPCMYF  P+GCRNGS C + H MS +            AKRMK  GE T GR
Sbjct: 500 PKFQKPCMYFRTPKGCRNGSDCHFQHDMSFQFQTGSGDSKLQVAKRMKFSGEITAGR 556


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