BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035445
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   203   2e-50
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   194   1e-47
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   174   9e-42
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   156   3e-36

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  207 bits (526), Expect = 2e-51
 Identities = 111/203 (54%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
 Frame = +2

Query: 20  MNQTKRFLASLRLANSVYSTWLDRSHLLYHQVTQFYPSLSPLSAQLNTSTFLYT-HQYLL 196
           MN+ K  L S+R  NS  ST   R+  L +QVTQ        S Q  TS F Y  +  L 
Sbjct: 1   MNRAKAILFSIRFTNSFRSTQFRRASSLCYQVTQSSRFSPSFSNQSYTSAFPYILYGKLF 60

Query: 197 FSSKPEPLVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATD 376
           FSSKP  +VELVL  DWS +LE EL KS+  L HETVIY+LK LDKDP + + FF W T+
Sbjct: 61  FSSKPNSIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWVTE 120

Query: 377 KIGFNPSSSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMAS 556
           K GF PSS+MYSL+L+ L + ++MK FWV +RKMKEQGF ID++TY TIL  FK  KMAS
Sbjct: 121 KNGFRPSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMAS 180

Query: 557 DATAFTYIHNRMIQDNAMDSVVK 625
           +  A T+ +NRM+Q+NAMD VVK
Sbjct: 181 EEVALTHFYNRMVQENAMDEVVK 203



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 40/115 (34%), Positives = 66/115 (57%)
 Frame = +2

Query: 218 LVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATDKIGFNPS 397
           +VELV    WS ++E +L +     +   V+++L+ L   PLKA +FF W  +  G+  S
Sbjct: 205 VVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECPGYEHS 264

Query: 398 SSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMASDA 562
           S  Y+++ ++L   D++ +FW +V +MK +G  +D DTY  I   F+  KM  DA
Sbjct: 265 SITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDA 319


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  203 bits (517), Expect = 2e-50
 Identities = 106/203 (52%), Positives = 141/203 (69%), Gaps = 1/203 (0%)
 Frame = +2

Query: 20  MNQTKRFLASLRLANSVYSTWLDRSHLLYHQVTQFYPSLSPLSAQLN-TSTFLYTHQYLL 196
           MN+ +  L SLRL+N + ST +  +     QVT F+P    LS + + TS ++  H+ L 
Sbjct: 1   MNRARTILVSLRLSNFLLSTRISTTRPFLTQVTHFFPCF--LSREHSYTSDYVNIHKKLY 58

Query: 197 FSSKPEPLVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATD 376
            SSKP  LVEL+   DWS +LE +L  S+P L HETVIY+LK LDKDP KA+ FF W  D
Sbjct: 59  SSSKPSSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFFNWVCD 118

Query: 377 KIGFNPSSSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMAS 556
           + GF PSS +YSL+L+IL  +D+MK+FW+ +RKMKEQGFY DE+TY TIL  F+  +M S
Sbjct: 119 RNGFKPSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRKERMDS 178

Query: 557 DATAFTYIHNRMIQDNAMDSVVK 625
           DA AF +  +RM+++NAMDSVVK
Sbjct: 179 DAVAFKHFFDRMVEENAMDSVVK 201



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/115 (33%), Positives = 62/115 (53%)
 Frame = +2

Query: 218 LVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATDKIGFNPS 397
           +V +V + +WS ++E EL      L    VI +LK L   PLKA +FF WA     +  +
Sbjct: 203 VVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECN 262

Query: 398 SSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMASDA 562
           +  Y+ + ++L   D++ +FW +V +MK  G  +D DTY  I   F+  K+  DA
Sbjct: 263 TITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDA 317


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  194 bits (492), Expect = 1e-47
 Identities = 106/202 (52%), Positives = 135/202 (66%)
 Frame = +2

Query: 20  MNQTKRFLASLRLANSVYSTWLDRSHLLYHQVTQFYPSLSPLSAQLNTSTFLYTHQYLLF 199
           M +      SLRLANS +ST   RS   Y QVT+F PS S +S Q   S F   H  L F
Sbjct: 1   MTRRNAIFTSLRLANSFFST---RSR--YPQVTRFSPS-SYVSHQSLVSHFTINHPVLFF 54

Query: 200 SSKPEPLVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATDK 379
           SS P+ L++LV + DWS+ LE EL   NP L HETV+Y+LK LDK P KA +FF WA+ K
Sbjct: 55  SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGK 114

Query: 380 IGFNPSSSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMASD 559
            G   SSS+YS+LL+I    ++MK FW+ +R MKE+GFY+DE+TYKTIL   +  K A+D
Sbjct: 115 NGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAAD 174

Query: 560 ATAFTYIHNRMIQDNAMDSVVK 625
           AT  T+ +NRM+Q NAMDSVV+
Sbjct: 175 ATGLTHFYNRMLQQNAMDSVVQ 196



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 37/117 (31%), Positives = 63/117 (53%)
 Frame = +2

Query: 212 EPLVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATDKIGFN 391
           + +V++VL  DWS  +  +L +    L+   VI +LK L   PLKA  FF W   +  ++
Sbjct: 196 QKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYD 255

Query: 392 PSSSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMASDA 562
            ++  Y+ + ++L   D+++ FW ++ +MK     ID DTY  I   F+  KM  +A
Sbjct: 256 HNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEA 312


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  174 bits (442), Expect = 9e-42
 Identities = 96/204 (47%), Positives = 133/204 (65%), Gaps = 3/204 (1%)
 Frame = +2

Query: 20  MNQTKRFLASLRLANSVYSTWLDRSHLLYHQVTQF-YPSLSPLSAQLNTSTFLYTHQYLL 196
           MN+ K   +SLR   S  +T   R  +  +QVT F   +  PL  + +   F  TH  L 
Sbjct: 1   MNRVKAIASSLRTLESSLAT---RVLVTRNQVTHFSLHNPLPLFDRSHHLRFPITHHKLY 57

Query: 197 FSSKPEP--LVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWA 370
           FS+KP+P  +VEL+L+ DWS+ LE +L    P + HETV+Y++K LDK+P KA  FF W 
Sbjct: 58  FSTKPKPNSIVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEKASCFFNWV 117

Query: 371 TDKIGFNPSSSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKM 550
             K+ F PS S+YSL+++ILA +D MK FWV +R MKE GF++DE+TY TI + FK  KM
Sbjct: 118 CKKVWFRPSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREKM 177

Query: 551 ASDATAFTYIHNRMIQDNAMDSVV 622
            SD+ A T+ +NRM+++NAM SVV
Sbjct: 178 DSDSVALTHFYNRMLEENAMQSVV 201



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/115 (31%), Positives = 65/115 (56%)
 Frame = +2

Query: 218 LVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATDKIGFNPS 397
           +V ++   +W  ++  EL+K   +L+   VI +LK L K PLKA+KFF W   + G+   
Sbjct: 204 VVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYEHD 263

Query: 398 SSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMASDA 562
           +  Y+ + ++L   +++++FW ++ +MK  G  +D DTY  I    +  +M  DA
Sbjct: 264 TVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDA 318


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323443|gb|EFH53864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score =  156 bits (394), Expect = 3e-36
 Identities = 87/200 (43%), Positives = 125/200 (62%)
 Frame = +2

Query: 20  MNQTKRFLASLRLANSVYSTWLDRSHLLYHQVTQFYPSLSPLSAQLNTSTFLYTHQYLLF 199
           M ++K  L+SLR A S  ST   RS+L   QV     S+SPL +    S FL+  ++  F
Sbjct: 1   MYRSKAILSSLRNAYSQIST---RSYLSRAQVGFSSNSISPLDSFAIPSRFLW--KFRTF 55

Query: 200 SSKPEPLVELVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWATDK 379
           SSKP+  ++LVL  DWSK++E  L K +  L HET IY+L+ L+K P KA+ F  W    
Sbjct: 56  SSKPDSTLQLVLENDWSKEVEEGLRKPDLSLTHETAIYVLRKLEKYPEKAYYFLDWVLRD 115

Query: 380 IGFNPSSSMYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMASD 559
            G +PS+ +YS++L+IL  Q +MK FW+ + +MK+ GFY+DEDTYKTI  +    K  +D
Sbjct: 116 SGLSPSTPLYSIMLRILVQQRSMKRFWMTLSEMKQGGFYLDEDTYKTIYGELNKEKSKAD 175

Query: 560 ATAFTYIHNRMIQDNAMDSV 619
           A A  + + RM+++NAM  V
Sbjct: 176 AVAVAHFYERMLKENAMSVV 195



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = +2

Query: 227 LVLSEDWSKQLEHELSKSNPKLAHETVIYILKGLDKDPLKAFKFFIWAT-DKIGFNPSSS 403
           +V   DWS ++E EL + N  L+   VI +LK L + PLKA  FF W      G+  S+ 
Sbjct: 202 VVTKVDWSCEVERELQEMNLVLSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQHSTV 261

Query: 404 MYSLLLQILANQDAMKDFWVIVRKMKEQGFYIDEDTYKTILMDFKSLKMASD 559
            Y+  L++LA  +++ +FW +V +MK  G  +D DTY  +   F+  +M ++
Sbjct: 262 TYNAALRVLARPNSVAEFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITE 313