BLASTX nr result

ID: Panax21_contig00035436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035436
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69165.1| hypothetical protein VITISV_015325 [Vitis vinifera]    82   8e-14
ref|XP_002279257.1| PREDICTED: ethylene-responsive transcription...    64   3e-08
ref|XP_002328681.1| AP2/ERF domain-containing transcription fact...    58   2e-06

>emb|CAN69165.1| hypothetical protein VITISV_015325 [Vitis vinifera]
          Length = 444

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
 Frame = -2

Query: 677 SVSEETNVLYSHPSPSSVLDVSTSMPTVDGSSNPIKETVTTTMQIADGLRKIVKEQPIVE 498
           S SEETN L+SHPSPSSVL++S S     GS N +KE         + +R   +EQPI  
Sbjct: 294 SSSEETNGLFSHPSPSSVLEISRSASI--GSGNSVKED-------DNAMRNDKEEQPI-S 343

Query: 497 FLKDPLSLFGND----FDEQPISELFEAPFVSPSICRELNLGFQENLQHDDNVGQFFNDL 330
            L  P S    D     D+ P + L E P   P   +ELNLGF +N    +N  +FF+DL
Sbjct: 344 SLTGPASSITEDNAMEEDKVPAASLLEEPLFFPPFNQELNLGFDDNSLFGNNFDEFFDDL 403

Query: 329 KDVDIE-ISLQELKNDGENHKLDFDFKLEEEAFDWLDDIL 213
              D+E + +   ++   N   +FDF+L++E   W+D+ L
Sbjct: 404 ---DMEGLPMCGFEDGATNGLPNFDFELDKE-LAWVDETL 439


>ref|XP_002279257.1| PREDICTED: ethylene-responsive transcription factor ERF118 [Vitis
           vinifera]
          Length = 320

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
 Frame = -2

Query: 677 SVSEETNVLYSHPSPSSVLDVSTSMPTVDG---SSNPIKETVTTTMQIADGLRKIVKEQP 507
           +VS++++ L SH SPSSVL++ TS    +G    ++  KE V T +  A+G  +      
Sbjct: 181 AVSDDSDSLLSHTSPSSVLELETSTSHYNGGGHGTDTTKEGVGTNLIHANGAEQ------ 234

Query: 506 IVEFLKDPLSLFGNDFDEQPISELFEAPFVSPSICRELNLGFQ-ENLQHDDNVGQFFNDL 330
                            ++PIS+  E P ++P I +ELN+  + E+   D+N G+  +D 
Sbjct: 235 -----------------QKPISDFAEEPLMAPPIGQELNMEAEFESFFDDNNWGRILDDF 277

Query: 329 KDVDIEISLQELKNDGENHKLDFDFKLEEEAFDWLDDIL*MS 204
             +D ++ +    N+  +   DFDF L  + F W+D+ L +S
Sbjct: 278 NCLD-DLRIFGFDNEEPSDLPDFDFDLGNDEFAWMDEPLNIS 318


>ref|XP_002328681.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222838857|gb|EEE77208.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 321

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/122 (36%), Positives = 65/122 (53%)
 Frame = -2

Query: 701 NNLNVACYSVSEETNVLYSHPSPSSVLDVSTSMPTVDGSSNPIKETVTTTMQIADGLRKI 522
           NNL+V    VSEE + L SHPSP SVLDVST      G  + ++            +   
Sbjct: 169 NNLHVDTKVVSEEFDGLCSHPSPLSVLDVSTMTSLGHGLESNVEMVAKEC-----NMESS 223

Query: 521 VKEQPIVEFLKDPLSLFGNDFDEQPISELFEAPFVSPSICRELNLGFQENLQHDDNVGQF 342
           +KE+  VE ++D     G++ + Q IS+L+E   +SPS+ +EL LGF +        GQF
Sbjct: 224 IKEESCVEMIED-----GSE-EVQCISDLWEERTLSPSVSQEL-LGFDQ----QSEFGQF 272

Query: 341 FN 336
           F+
Sbjct: 273 FD 274


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