BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035434
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   359   6e-97
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   305   1e-80
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   297   3e-78
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   238   1e-60
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...   180   5e-43

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
            [Vitis vinifera]
          Length = 569

 Score =  359 bits (922), Expect = 6e-97
 Identities = 173/282 (61%), Positives = 222/282 (78%)
 Frame = -3

Query: 1059 CQYGKVEIIEFVMDSMVKNGYIQKLPLLEYDSVIQKLSDLGKTYAVDMFFKRACDEKVEL 880
            C+Y   E+I+ VM SMV+ G + KL L EYDS+IQK+ +LGKT+A  MFFKRA +EK+EL
Sbjct: 288  CKYENDEVIQIVMGSMVEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIEL 347

Query: 879  QDASYGCMLRAFSKEGRVKVTIVVHGIMLERGTVANDSCYNSLVNVLCKEDPSKKVSKLL 700
             +A+YGCMLRA +K+GRVK  I V+ ++LE G    D CY++ VNVLC+EDPS++VSKL+
Sbjct: 348  DNATYGCMLRALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLM 407

Query: 699  RDMIGRGFCPCLSELSKFITSQCNTRQWREAEELLNVVLEKGLLPDSSCSSYFVEHYCFS 520
             ++IG+GF PC S+LSKFITS C   +W EA++LLNV +EKGLLPDS C S  VEHYC S
Sbjct: 408  GEIIGKGFSPCGSKLSKFITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRS 467

Query: 519  RQIDSAIMLHNTLEKLEGTLDTKTYNVLLDGLLRERRVEEAIRVFNYMRSHNLLNAASFS 340
            RQIDS+I LH  ++K++G+LD  TYNVLL+GL  E+R+E+A+ VF+ MRS NLL++ SF+
Sbjct: 468  RQIDSSIALHEKIKKVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFT 527

Query: 339  AMISGLCHENELRKAMKLHDDMLKMGLKPDVKRYKRLISSFK 214
             M+SGLC E ELRKAMK HD+MLKMGLKPD   YKRLIS FK
Sbjct: 528  IMVSGLCRERELRKAMKFHDEMLKMGLKPDRATYKRLISGFK 569



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
 Frame = -3

Query: 798 MLERGTVANDSCYNSLVNVLCKEDPSKKVSKLLRDMIGRGFCPCLSELSKFITSQCNTRQ 619
           +L+   V N   Y  +++  C+          L +M  R F P     +  +   C    
Sbjct: 233 LLDMSIVCNALIYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYEN 292

Query: 618 WREAEELLNVVLEKGLLPDSSCSSY--FVEHYCFSRQIDSAIMLHNTLEKLEGTLDTKTY 445
               + ++  ++EKGLLP    S Y   ++  C   +  +A M        +  LD  TY
Sbjct: 293 DEVIQIVMGSMVEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATY 352

Query: 444 NVLLDGLLRERRVEEAIRVF-NYMRSHNLLNAASFSAMISGLCHENELRKAMKLHDDMLK 268
             +L  L ++ RV+EAI V+   + S   +    + A ++ LC E+  ++  KL  +++ 
Sbjct: 353 GCMLRALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEIIG 412

Query: 267 MGLKPDVKRYKRLISS 220
            G  P   +  + I+S
Sbjct: 413 KGFSPCGSKLSKFITS 428


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  305 bits (782), Expect = 1e-80
 Identities = 152/281 (54%), Positives = 198/281 (70%)
 Frame = -3

Query: 1059 CQYGKVEIIEFVMDSMVKNGYIQKLPLLEYDSVIQKLSDLGKTYAVDMFFKRACDEKVEL 880
            C++G  E+IE VMD M + G + K PL + DSVIQK SDL K     MFF+RACDEK+ L
Sbjct: 282  CKHGNEEVIERVMDIMAEKGLLPKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKIGL 341

Query: 879  QDASYGCMLRAFSKEGRVKVTIVVHGIMLERGTVANDSCYNSLVNVLCKEDPSKKVSKLL 700
            QDA+YGCML+A SKE RVK  I ++ ++ E+G    DS Y++ +++L +ED  ++  ++L
Sbjct: 342  QDATYGCMLKALSKEARVKEAIGLYSLISEKGIRVKDSTYHAFLDLLSEEDQYEEGYEIL 401

Query: 699  RDMIGRGFCPCLSELSKFITSQCNTRQWREAEELLNVVLEKGLLPDSSCSSYFVEHYCFS 520
             DM+ RGF P    LSKFI      R+WRE E+LL++VLEKGLLPDS C    VEHYC  
Sbjct: 402  GDMMRRGFRPGTVGLSKFILLLSRKRRWREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSR 461

Query: 519  RQIDSAIMLHNTLEKLEGTLDTKTYNVLLDGLLRERRVEEAIRVFNYMRSHNLLNAASFS 340
            RQID A+ LHN +EKL+ +LD  TYN+LLDGL++  R+EE +RVF+YM+   L+N+ SF+
Sbjct: 462  RQIDKAVALHNKMEKLQASLDVATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFT 521

Query: 339  AMISGLCHENELRKAMKLHDDMLKMGLKPDVKRYKRLISSF 217
              I GLC   E+RKAMKLHD+ML MGLKPD   YKRLI  F
Sbjct: 522  ITIRGLCRAKEMRKAMKLHDEMLDMGLKPDKAAYKRLILEF 562



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
 Frame = -3

Query: 780 VANDSCYNSLVNVLCKEDPSKKVSKLLRDMIGRGFCPCLSELSKFITSQCNTRQWREAEE 601
           V N   YN +++   K    +   + L  M  R   P  S  S  +   C        E 
Sbjct: 233 VYNSVLYNGVIDCCSKRGDFEAAFERLNQMCERKLDPGFSTYSAILDGACKHGNEEVIER 292

Query: 600 LLNVVLEKGLLPD---SSCSSYFVEHYCFSRQIDSAIMLHNTLEKLEGTLDTKTYNVLLD 430
           +++++ EKGLLP    S C S   +     +   + +      ++  G  D  TY  +L 
Sbjct: 293 VMDIMAEKGLLPKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKIGLQDA-TYGCMLK 351

Query: 429 GLLRERRVEEAIRVFNYMRSHNL-LNAASFSAMISGLCHENELRKAMKLHDDMLKMGLKP 253
            L +E RV+EAI +++ +    + +  +++ A +  L  E++  +  ++  DM++ G +P
Sbjct: 352 ALSKEARVKEAIGLYSLISEKGIRVKDSTYHAFLDLLSEEDQYEEGYEILGDMMRRGFRP 411


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  297 bits (761), Expect = 3e-78
 Identities = 149/281 (53%), Positives = 201/281 (71%)
 Frame = -3

Query: 1059 CQYGKVEIIEFVMDSMVKNGYIQKLPLLEYDSVIQKLSDLGKTYAVDMFFKRACDEKVEL 880
            C+   +++IE V+  MV    + K P  +YDS+IQKL DLGK  A  +FFKRACDE++ L
Sbjct: 311  CKCRNLQVIERVVAIMVGKQLLSKCPSSDYDSIIQKLCDLGKVSAATLFFKRACDERIGL 370

Query: 879  QDASYGCMLRAFSKEGRVKVTIVVHGIMLERGTVANDSCYNSLVNVLCKEDPSKKVSKLL 700
            QDA+YG MLRAFS EG ++  I ++ ++LERG    D+  ++ V++L ++D   +  +++
Sbjct: 371  QDATYGRMLRAFSIEGILEEAIGLYQVILERGLTIKDNASDAFVDLLSEKDQYAEGYEIV 430

Query: 699  RDMIGRGFCPCLSELSKFITSQCNTRQWREAEELLNVVLEKGLLPDSSCSSYFVEHYCFS 520
            RD++ RGF PC S LSK+IT  C  R+W+EAEELL +VLEKGLLPD+      V+HYC S
Sbjct: 431  RDIMRRGFSPCTSSLSKYITLLCKKRRWKEAEELLYMVLEKGLLPDTLSFCSLVKHYCSS 490

Query: 519  RQIDSAIMLHNTLEKLEGTLDTKTYNVLLDGLLRERRVEEAIRVFNYMRSHNLLNAASFS 340
            +Q D A+ LHNTLEKL+ +LD   YN+LL GL++E RVEE+I+VF+YM+   L N+ASF+
Sbjct: 491  KQTDKALALHNTLEKLQASLDITAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFT 550

Query: 339  AMISGLCHENELRKAMKLHDDMLKMGLKPDVKRYKRLISSF 217
             +I GLC   ELRKAMKLHD+ML MGLKPD   YKRLI  F
Sbjct: 551  VIIRGLCRAKELRKAMKLHDEMLNMGLKPDKPTYKRLILEF 591


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  238 bits (608), Expect = 1e-60
 Identities = 120/287 (41%), Positives = 189/287 (65%), Gaps = 5/287 (1%)
 Frame = -3

Query: 1059 CQYGKVEIIEFVMDSMVKNGYIQKLPLLEYDSVIQKLSDLGKTYAVDMFFKRACD-EKVE 883
            C+ G  E I+ V+  MV+  ++        D +I++L D+GKT+A +M F++AC+ E V 
Sbjct: 299  CRLGDAEFIDKVLCLMVEKKFVTLGDSAVNDKIIERLCDMGKTFASEMLFRKACNGETVR 358

Query: 882  LQDASYGCMLRAFSKEGRVKVTIVVHGIMLERG-TVANDSCYNSLVNVLCKED-PSKKVS 709
            L D++YGCML+A S++ R K  + V+ ++  +G TV ++SCY    N LC++D  S++  
Sbjct: 359  LWDSTYGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYIEFANALCRDDNSSEEEE 418

Query: 708  KLLRDMIGRGFCPCLSELSKFITSQCNTRQWREAEELLNVVLEKGLLPDSSCSSYFVEHY 529
            +LL D+I RGF PC  +LS+ + S C  R+W+ AE+LL+ V+E  +  DS      +E Y
Sbjct: 419  ELLVDVIKRGFVPCTHKLSEVLASMCRKRRWKSAEKLLDSVMEMEVYFDSFACGLLMERY 478

Query: 528  CFSRQIDSAIMLHNTLEKLEGTLDTKTYNVLLDGLLRERR--VEEAIRVFNYMRSHNLLN 355
            C S +++ A++LH  ++K++G+LD   YN +LD L+  ++  VEEA+ VF YM+  N +N
Sbjct: 479  CRSGKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVN 538

Query: 354  AASFSAMISGLCHENELRKAMKLHDDMLKMGLKPDVKRYKRLISSFK 214
            + SF+ MI GLC   E++KAM+ HD+ML++GLKPD+  YKRLI  FK
Sbjct: 539  SKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLILGFK 585


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|332659015|gb|AEE84415.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score =  180 bits (457), Expect = 5e-43
 Identities = 102/287 (35%), Positives = 166/287 (57%), Gaps = 5/287 (1%)
 Frame = -3

Query: 1059 CQYGKVEIIEFVMDSMVKNGYIQKLPLLEYDSVIQKLSDLGKTYAVDMFFKRACD-EKVE 883
            C+ G  E I+ V+  MV+  ++        D +I++L D+GKT+A +M F++AC+ E V 
Sbjct: 299  CRLGDAEFIDKVLCLMVEKKFVTLGDSAVNDKIIERLCDMGKTFASEMLFRKACNGETVR 358

Query: 882  LQDASYGCMLRAFSKEGRVKVTIVVHGIMLERG-TVANDSCYNSLVNVLCKEDPSKKVSK 706
            L D++YGCML+A S++ R K  + V+ ++  +G TV ++SCY    N LC++D S +   
Sbjct: 359  LWDSTYGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYIEFANALCRDDNSSE--- 415

Query: 705  LLRDMIGRGFCPCLSELSKFITSQCNTRQWREAEELLNVVLEKGLLPDSSCSSYFVEHYC 526
                                           E EELL  V+++G    +   S+ +  + 
Sbjct: 416  -------------------------------EEEELLVDVIKRGKEDGNPQRSFLIRLWK 444

Query: 525  F-SRQIDSAIMLHNTLEKLEGTLDTKTYNVLLDGLLRERR--VEEAIRVFNYMRSHNLLN 355
            + S +++ A++LH  ++K++G+LD   YN +LD L+  ++  VEEA+ VF YM+  N +N
Sbjct: 445  WRSGKLEKALVLHEKIKKMKGSLDVNAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVN 504

Query: 354  AASFSAMISGLCHENELRKAMKLHDDMLKMGLKPDVKRYKRLISSFK 214
            + SF+ MI GLC   E++KAM+ HD+ML++GLKPD+  YKRLI  FK
Sbjct: 505  SKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLILGFK 551