BLASTX nr result

ID: Panax21_contig00035427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035427
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vi...   197   6e-49
ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMA...   194   5e-48
ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-lik...   194   5e-48
ref|XP_003519249.1| PREDICTED: protein DAMAGED DNA-BINDING 2-lik...   194   8e-48
ref|XP_003544882.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Gl...   193   1e-47

>ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vitis vinifera]
           gi|147833025|emb|CAN61895.1| hypothetical protein
           VITISV_028792 [Vitis vinifera]
           gi|297745903|emb|CBI15959.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  197 bits (502), Expect = 6e-49
 Identities = 88/119 (73%), Positives = 106/119 (89%)
 Frame = +3

Query: 15  CLA*GHTTITCPHRVATEYGVIPAPHKNSRNSLEFVFERQLRPTITKIKPAFVIPKQVIC 194
           C   GHTT+TCPH+VATE+GVIPAP++N+R+SL++VF RQL+P I  IK AF++P QV C
Sbjct: 105 CKMPGHTTMTCPHKVATEHGVIPAPNRNTRSSLDYVFRRQLQPDIPAIKTAFIVPNQVDC 164

Query: 195 AVIRYHSKRVTCLEFHPSRSNILLSGDKKGQLGVWDFGKVHEKTVYGNIHGCILNHMKF 371
           AVIRYHS+RVTCLEFHP+ +NILLSGDKKGQLGVWD+ KVHEKTVYGNIH CILN+M+F
Sbjct: 165 AVIRYHSRRVTCLEFHPTNNNILLSGDKKGQLGVWDYNKVHEKTVYGNIHHCILNNMRF 223


>ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMAGED DNA-BINDING 2-like
           [Cucumis sativus]
          Length = 562

 Score =  194 bits (494), Expect = 5e-48
 Identities = 87/119 (73%), Positives = 103/119 (86%)
 Frame = +3

Query: 15  CLA*GHTTITCPHRVATEYGVIPAPHKNSRNSLEFVFERQLRPTITKIKPAFVIPKQVIC 194
           C   GHTT+TCPHRVATE+GVIPA HKN+RN+L +VFERQ +P I  IKPA+VIP QV C
Sbjct: 105 CKMPGHTTMTCPHRVATEFGVIPASHKNTRNALLYVFERQFKPHIPPIKPAYVIPDQVNC 164

Query: 195 AVIRYHSKRVTCLEFHPSRSNILLSGDKKGQLGVWDFGKVHEKTVYGNIHGCILNHMKF 371
           AVIRYHS+RVTCLEFHP+ + +LLSGDKKGQ+GVWD+ KVHEK VYGNIH CI+N+M+F
Sbjct: 165 AVIRYHSRRVTCLEFHPTNNRLLLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRF 223


>ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-like [Cucumis sativus]
          Length = 562

 Score =  194 bits (494), Expect = 5e-48
 Identities = 87/119 (73%), Positives = 103/119 (86%)
 Frame = +3

Query: 15  CLA*GHTTITCPHRVATEYGVIPAPHKNSRNSLEFVFERQLRPTITKIKPAFVIPKQVIC 194
           C   GHTT+TCPHRVATE+GVIPA HKN+RN+L +VFERQ +P I  IKPA+VIP QV C
Sbjct: 105 CKMPGHTTMTCPHRVATEFGVIPASHKNTRNALLYVFERQFKPHIPPIKPAYVIPDQVNC 164

Query: 195 AVIRYHSKRVTCLEFHPSRSNILLSGDKKGQLGVWDFGKVHEKTVYGNIHGCILNHMKF 371
           AVIRYHS+RVTCLEFHP+ + +LLSGDKKGQ+GVWD+ KVHEK VYGNIH CI+N+M+F
Sbjct: 165 AVIRYHSRRVTCLEFHPTNNRLLLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRF 223


>ref|XP_003519249.1| PREDICTED: protein DAMAGED DNA-BINDING 2-like [Glycine max]
          Length = 556

 Score =  194 bits (492), Expect = 8e-48
 Identities = 84/120 (70%), Positives = 105/120 (87%)
 Frame = +3

Query: 15  CLA*GHTTITCPHRVATEYGVIPAPHKNSRNSLEFVFERQLRPTITKIKPAFVIPKQVIC 194
           C   GHTT+TCPHRV+TE+GV+PAP + +   LE+VFERQLRP++  IKP +VIP QV C
Sbjct: 104 CKMPGHTTLTCPHRVSTEHGVVPAPRRKACKPLEYVFERQLRPSLPSIKPKYVIPDQVNC 163

Query: 195 AVIRYHSKRVTCLEFHPSRSNILLSGDKKGQLGVWDFGKVHEKTVYGNIHGCILNHMKFD 374
           AVIRYHS+R+TCLEFHP+++NILLSGDKKGQLGVWDFGKV+EK VYGNIH C++N+M+F+
Sbjct: 164 AVIRYHSRRITCLEFHPTKNNILLSGDKKGQLGVWDFGKVYEKVVYGNIHSCLVNNMRFN 223


>ref|XP_003544882.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Glycine max]
          Length = 561

 Score =  193 bits (490), Expect = 1e-47
 Identities = 84/120 (70%), Positives = 105/120 (87%)
 Frame = +3

Query: 15  CLA*GHTTITCPHRVATEYGVIPAPHKNSRNSLEFVFERQLRPTITKIKPAFVIPKQVIC 194
           C   GHTT+TCPHRV+TE+GV+PAP + +   L++VFERQLRP++  IKP +VIP QV C
Sbjct: 110 CKMPGHTTLTCPHRVSTEHGVVPAPRRKTCKPLDYVFERQLRPSLPSIKPKYVIPDQVNC 169

Query: 195 AVIRYHSKRVTCLEFHPSRSNILLSGDKKGQLGVWDFGKVHEKTVYGNIHGCILNHMKFD 374
           AVIRYHS+RVTCLEFHP+++NILLSGDKKGQLGVWDFGKV+EK VYGNIH C++N+M+F+
Sbjct: 170 AVIRYHSRRVTCLEFHPTKNNILLSGDKKGQLGVWDFGKVYEKVVYGNIHSCLVNNMRFN 229


Top