BLASTX nr result

ID: Panax21_contig00035423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035423
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichoca...    79   5e-13
ref|XP_002332551.1| cc-nbs-lrr resistance protein [Populus trich...    72   6e-11
ref|XP_002328102.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichoca...    55   8e-06

>ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834485|gb|EEE72962.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 963

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
 Frame = -1

Query: 457  LQSCTFLSSLEIIDCKKLNCLPE-GLWCLTRLKTLRIGPFSEELNSFPSLEGLQHLQLSL 281
            L+    L  LE+  C  LN  PE  L CLTRLK L +GPFSE+L +FP L  +QHL  SL
Sbjct: 811  LRELRSLLHLEVTKCPSLNYFPEDSLCCLTRLKQLTVGPFSEKLKTFPGLNSIQHLS-SL 869

Query: 280  KRVELRGWDHWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPEQLQH 101
            + V + GWD                                            +P+QLQ+
Sbjct: 870  EEVVISGWD----------------------------------------KLTSLPDQLQY 889

Query: 100  LIALEELSIHGFGMMEVMPEWFGNFSSLKDL 8
            + +L+ L I  F  M+ +PEW G+   L+ L
Sbjct: 890  ITSLKSLYIRRFNGMKALPEWLGSLKCLQQL 920


>ref|XP_002332551.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222833027|gb|EEE71504.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1210

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 57/159 (35%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
 Frame = -1

Query: 457  LQSCTFLSSLEIIDCKKLNCLPEG--LWCLTRLKTLRIGPFSEELNSFPS--LEGLQHLQ 290
            L+    L  LEI  C+ L  +PE   L  LT+LK LRIG FSEE+ +FP+  L   QH  
Sbjct: 980  LRKLPSLVFLEISGCQNLKNVPEDDCLGSLTQLKQLRIGGFSEEMEAFPAGVLNSFQHPN 1039

Query: 289  L--SLKRVELRGWDHWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIP 116
            L  SLK +E+ GWD                                            +P
Sbjct: 1040 LSGSLKSLEIHGWD----------------------------------------KLKSVP 1059

Query: 115  EQLQHLIALEELSIHGF---GMMEVMPEWFGNFSSLKDL 8
             QLQHL AL+ LSI  F   G  E +PEW  N SSL+ L
Sbjct: 1060 HQLQHLTALKTLSICDFMGEGFEEALPEWMANLSSLQSL 1098


>ref|XP_002328102.1| predicted protein [Populus trichocarpa] gi|222837617|gb|EEE75982.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
 Frame = -1

Query: 439 LSSLEIIDCKKLNCLPEGLWC-LTRLKTLRIGPFSEELNSFPSLEGLQHLQLSLKRVELR 263
           L  LEI  C+ L+ +PE  +C L +L+ L+IG FSEEL +FP +  + HL  SLK++++ 
Sbjct: 211 LIQLEISFCQNLSHIPEDFFCGLNQLRVLKIGSFSEELEAFPGMNSIHHLGGSLKKLKIF 270

Query: 262 GWDHWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPEQLQHLIALEE 83
           GW +                                           +P QLQHL +L +
Sbjct: 271 GWKN----------------------------------------LKSLPHQLQHLTSLVK 290

Query: 82  LSIHGFG---MMEVMPEWFGNFSSLKDLKL 2
           L I  F      E +P+W  N SSL++L +
Sbjct: 291 LKIFYFDGEEFDEALPDWLANLSSLQELTI 320


>ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222835078|gb|EEE73527.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1009

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
 Frame = -1

Query: 457  LQSCTFLSSLEIIDCKKLNCLPEG-LWCLTRLKTLRIGPFSEELNSFPS--LEGLQHLQL 287
            LQ C+ L    II C+ L+  PE  L  L +LK L+IG FSEEL  FP+  +  ++HL  
Sbjct: 920  LQLCS-LVYFGIIGCRSLSYFPEDCLGGLAQLKGLKIGGFSEELEGFPTGVVNSIKHLSG 978

Query: 286  SLKRVELRGWD 254
            SL+R+E+ GWD
Sbjct: 979  SLERLEINGWD 989


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