BLASTX nr result
ID: Panax21_contig00035420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00035420
(697 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 176 2e-54
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 176 2e-54
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 179 9e-54
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 174 9e-54
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 181 1e-53
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 176 bits (447), Expect(2) = 2e-54
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = -1
Query: 472 ILRKNGKVYVGSGGNLRQKIMEQVHSSSEGGHSGMTASIKRAEMLFYWPTLKRDLTELVR 293
ILR + VG+G LR++++ H S+ GGHSG A+ +R + LFYWP +K +T+ V+
Sbjct: 430 ILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVK 489
Query: 292 QCEICQRHKGEHVPTPGLLQPIPIPDQAWEVITMDFIEGLPKSEGKDTILVIVDKLTKGC 113
C +CQ++K EH GLLQP+P+P+ AW ITMDF+EGLPKSEGKD I VIVD+ TK
Sbjct: 490 ACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYA 549
Query: 112 HLIALTHPFTATQVAQSVLDSVIKLHGPPRIIISDR 5
H I L+HPFTA Q+ L+ KLHG P +I+SDR
Sbjct: 550 HFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDR 585
Score = 62.4 bits (150), Expect(2) = 2e-54
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = -3
Query: 692 MLGFDYKIQYKKGKDNVAADALSRSQETECNNTVVQTVVPSWNKEVYGSLDDDLEAQDIM 513
+L +DYKI+YKKG++N AADALSR Q+ T V +VP W EV S D + ++
Sbjct: 354 LLSYDYKIEYKKGQENKAADALSRMQQLNALTTTV--IVPQWITEVAASYSTDPKCHELE 411
Query: 512 TQLIVDPHSQPG*YLK 465
+ L + P S P LK
Sbjct: 412 SHLHIAPQSHPPYTLK 427
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 176 bits (447), Expect(2) = 2e-54
Identities = 81/156 (51%), Positives = 108/156 (69%)
Frame = -1
Query: 472 ILRKNGKVYVGSGGNLRQKIMEQVHSSSEGGHSGMTASIKRAEMLFYWPTLKRDLTELVR 293
ILR + VG+G LR++++ H S+ GGHSG A+ +R + LFYWP +K +T+ V+
Sbjct: 209 ILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVK 268
Query: 292 QCEICQRHKGEHVPTPGLLQPIPIPDQAWEVITMDFIEGLPKSEGKDTILVIVDKLTKGC 113
C +CQ++K EH GLLQP+P+P+ AW ITMDF+EGLPKSEGKD I VIVD+ TK
Sbjct: 269 ACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYA 328
Query: 112 HLIALTHPFTATQVAQSVLDSVIKLHGPPRIIISDR 5
H I L+HPFTA Q+ L+ KLHG P +I+SDR
Sbjct: 329 HFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDR 364
Score = 62.4 bits (150), Expect(2) = 2e-54
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = -3
Query: 692 MLGFDYKIQYKKGKDNVAADALSRSQETECNNTVVQTVVPSWNKEVYGSLDDDLEAQDIM 513
+L +DYKI+YKKG++N AADALSR Q+ T V +VP W EV S D + ++
Sbjct: 133 LLSYDYKIEYKKGQENKAADALSRMQQLNALTTTV--IVPQWITEVAASYSTDPKCHELE 190
Query: 512 TQLIVDPHSQPG*YLK 465
+ L + P S P LK
Sbjct: 191 SHLHIAPQSHPPYTLK 206
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 179 bits (455), Expect(2) = 9e-54
Identities = 79/156 (50%), Positives = 111/156 (71%)
Frame = -1
Query: 472 ILRKNGKVYVGSGGNLRQKIMEQVHSSSEGGHSGMTASIKRAEMLFYWPTLKRDLTELVR 293
+LR G++YVG LR I+ +H S+ GGHSG A+ +R + LFYWP +K+++ +VR
Sbjct: 900 VLRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVR 959
Query: 292 QCEICQRHKGEHVPTPGLLQPIPIPDQAWEVITMDFIEGLPKSEGKDTILVIVDKLTKGC 113
+C +CQR K EH PGLL+P+PIPD AW I+MDFIEGLP S+GK+ I V+VD+ TK
Sbjct: 960 ECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYA 1019
Query: 112 HLIALTHPFTATQVAQSVLDSVIKLHGPPRIIISDR 5
H + L+HP++ VAQ+ +D++ KLHG P I+SDR
Sbjct: 1020 HSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDR 1055
Score = 57.0 bits (136), Expect(2) = 9e-54
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = -3
Query: 692 MLGFDYKIQYKKGKDNVAADALSRSQETECNNTVVQTVVPSWNKEVYGSLDDDLEAQDIM 513
+L FDY I+YKKGK+N ADALSR + + VPSW + V S +D +++M
Sbjct: 825 LLEFDYTIEYKKGKENKVADALSRRGNSV---MAISIAVPSWIEAVTNSYQNDANCKELM 881
Query: 512 TQLIVDPHSQPG 477
QL + P++ G
Sbjct: 882 EQLTLAPNADSG 893
>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 592
Score = 174 bits (441), Expect(2) = 9e-54
Identities = 78/156 (50%), Positives = 114/156 (73%)
Frame = -1
Query: 472 ILRKNGKVYVGSGGNLRQKIMEQVHSSSEGGHSGMTASIKRAEMLFYWPTLKRDLTELVR 293
ILR G++Y+GS L+++++ H S+ GGHSG + +R +++F+WP +K+++ E V+
Sbjct: 285 ILRYKGRLYIGSNTGLKRQLLVTFHDSALGGHSGGRVTYQRLKLIFHWPRMKQEVEEFVK 344
Query: 292 QCEICQRHKGEHVPTPGLLQPIPIPDQAWEVITMDFIEGLPKSEGKDTILVIVDKLTKGC 113
++CQ++ EHVP PGLLQPIPIP+ AW I+MDFIEGLPKSE K+ ILV+VD+ TK
Sbjct: 345 LYDVCQKNNCEHVPYPGLLQPIPIPEMAWTHISMDFIEGLPKSEDKEVILVVVDRFTKYS 404
Query: 112 HLIALTHPFTATQVAQSVLDSVIKLHGPPRIIISDR 5
H IAL+HPFT V + +D+V K HG P +II++R
Sbjct: 405 HFIALSHPFTVQHVVKVFVDNVFKHHGLPSVIITNR 440
Score = 62.4 bits (150), Expect(2) = 9e-54
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = -3
Query: 692 MLGFDYKIQYKKGKDNVAADALSRSQETECNNTVVQTVVPSWNKEVYGSLDDDLEAQDIM 513
+LG++YK++YK+G++N A DALSR + + + V P W EV S + D + +D++
Sbjct: 208 LLGYNYKVEYKRGRENKATDALSRVRYND-QVVAISAVTPVWILEVLASYEGDEKCRDLI 266
Query: 512 TQLIVDPHSQPG*YLK 465
TQ+ + P +QP LK
Sbjct: 267 TQISISPTAQPNYSLK 282
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 181 bits (460), Expect(2) = 1e-53
Identities = 81/156 (51%), Positives = 112/156 (71%)
Frame = -1
Query: 472 ILRKNGKVYVGSGGNLRQKIMEQVHSSSEGGHSGMTASIKRAEMLFYWPTLKRDLTELVR 293
ILR ++YVG+G +LR K+ + H S+ GGHSG A+ +RA++LFYWP +K+D+ V+
Sbjct: 875 ILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVK 934
Query: 292 QCEICQRHKGEHVPTPGLLQPIPIPDQAWEVITMDFIEGLPKSEGKDTILVIVDKLTKGC 113
C +CQ++K EH PGLL P+PIP+ AW I+MDFIEGLPKS+ KD I VIVD+ TK
Sbjct: 935 LCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTKYA 994
Query: 112 HLIALTHPFTATQVAQSVLDSVIKLHGPPRIIISDR 5
H +AL+HPFTA Q+ +++ K HG P +I+SDR
Sbjct: 995 HFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDR 1030
Score = 54.7 bits (130), Expect(2) = 1e-53
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -3
Query: 692 MLGFDYKIQYKKGKDNVAADALSR-SQETECNNTVVQTVVPSWNKEVYGSLDDDLEAQDI 516
+L +DYKI+YKKGK+N AADALSR + +T + +VP+W E+ S D + +
Sbjct: 798 LLSYDYKIEYKKGKENKAADALSRIPSVAQLFSTTI--IVPTWITEILASYATDPKCTAL 855
Query: 515 MTQLIVDPHSQP 480
+QL + P P
Sbjct: 856 ESQLRITPQGHP 867