BLASTX nr result

ID: Panax21_contig00035416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035416
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43245.1| unknown [Medicago truncatula]                           64   1e-08
ref|XP_003532861.1| PREDICTED: protein MKS1-like [Glycine max]         63   2e-08
ref|XP_003630243.1| Protein MKS1 [Medicago truncatula] gi|355524...    63   2e-08
ref|XP_004163883.1| PREDICTED: protein MKS1-like [Cucumis sativus]     62   6e-08
ref|XP_004147377.1| PREDICTED: protein MKS1-like [Cucumis sativus]     62   6e-08

>gb|AFK43245.1| unknown [Medicago truncatula]
          Length = 214

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 48/108 (44%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   ARLASIEKISPPEGGRERVNAG---KFMGMDEGFEMGQFPGIXXXXXXXXXXVPQGMFSP 173
           ARLASIE+ SP E  RER+          + EG EMGQFPGI          + QG FSP
Sbjct: 109 ARLASIERTSPTE--RERIQQTVDEDLTWLLEGVEMGQFPGILSPAPATLPPISQGFFSP 166

Query: 174 GYD---FSLLNDMSPY-LNNMFTPSPSSLLSAPMVSPSPSSFDILSQF 305
             +       +D SP+   N F  SPS LLSA +VSP PS  D+ S F
Sbjct: 167 MNEPQTTPFWHDTSPFWYGNSFVASPSGLLSATVVSPLPSP-DLFSIF 213


>ref|XP_003532861.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 198

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   ARLASIEKISPPEGGRERVNAGKFMGMDEGFEMGQFPGIXXXXXXXXXXVPQGMFSPGYD 182
           ARLASIE+ SP E  +          M EG E+GQFPGI          +  G FS    
Sbjct: 99  ARLASIERTSPSEREKVHSEDNDVKLMLEGVEVGQFPGI--LSPATLPPISPGFFSEPQT 156

Query: 183 FSLLNDMSPYLN-NMFTPSPSSLLSAPMVSPSPSSFDILSQF 305
            S  ND+SP+ + N F  SPS LLS  +VSP PS  DI + F
Sbjct: 157 TSFWNDLSPFWSTNSFVASPSGLLSGALVSPLPSP-DIFNLF 197


>ref|XP_003630243.1| Protein MKS1 [Medicago truncatula] gi|355524265|gb|AET04719.1|
           Protein MKS1 [Medicago truncatula]
          Length = 226

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/100 (45%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
 Frame = +3

Query: 3   ARLASIEKISPPEGGRERVNAG---KFMGMDEGFEMGQFPGIXXXXXXXXXXVPQGMFSP 173
           ARLASIE+ SP E  RER+          + EG EMGQFPGI          + QG FSP
Sbjct: 109 ARLASIERTSPTE--RERIQQTVDEDLTWLLEGVEMGQFPGILSPAPATLPPISQGFFSP 166

Query: 174 GYD---FSLLNDMSPY-LNNMFTPSPSSLLSAPMVSPSPS 281
             +       +D SP+   N F  SPS LLSA +VSP PS
Sbjct: 167 MNEPQTTPFWHDTSPFWYGNSFVASPSGLLSATVVSPLPS 206


>ref|XP_004163883.1| PREDICTED: protein MKS1-like [Cucumis sativus]
          Length = 212

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
 Frame = +3

Query: 3   ARLASIEKISPPEGGRERVNAGKFMGMDE-GFEMGQFPGIXXXXXXXXXXVPQGMFSP-- 173
           ARLA+IEK SP       +N    M + E   E+GQ PGI          +P G FSP  
Sbjct: 109 ARLATIEKASPRSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAI 168

Query: 174 ---GYDFSLLNDMSPYLNNMFTPSPSSLLSAPMVSPSPSSFDILSQFFD 311
               + +SL +++SP+       SPS+L S P++SP  SS +I +  FD
Sbjct: 169 EPQSFSYSLFHELSPH-----WASPSALFSTPLISPI-SSPNIFNNLFD 211


>ref|XP_004147377.1| PREDICTED: protein MKS1-like [Cucumis sativus]
          Length = 241

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
 Frame = +3

Query: 3   ARLASIEKISPPEGGRERVNAGKFMGMDE-GFEMGQFPGIXXXXXXXXXXVPQGMFSP-- 173
           ARLA+IEK SP       +N    M + E   E+GQ PGI          +P G FSP  
Sbjct: 109 ARLATIEKASPRSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAI 168

Query: 174 ---GYDFSLLNDMSPYLNNMFTPSPSSLLSAPMVSPSPSSFDILSQFFD 311
               + +SL +++SP+       SPS+L S P++SP  SS +I +  FD
Sbjct: 169 EPQSFSYSLFHELSPH-----WASPSALFSTPLISPI-SSPNIFNNLFD 211


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