BLASTX nr result

ID: Panax21_contig00035403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035403
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310889.1| predicted protein [Populus trichocarpa] gi|2...   123   6e-26
ref|XP_002525296.1| conserved hypothetical protein [Ricinus comm...   107   3e-21
emb|CAN77738.1| hypothetical protein VITISV_020689 [Vitis vinifera]    76   1e-11
ref|XP_002320006.1| predicted protein [Populus trichocarpa] gi|2...    74   5e-11

>ref|XP_002310889.1| predicted protein [Populus trichocarpa] gi|222853792|gb|EEE91339.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  123 bits (308), Expect = 6e-26
 Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 8/177 (4%)
 Frame = -1

Query: 701 YQQTERKPKPSPSYHSALHSIRXXXXXXXXXXXXXXXXXXXXXKIYQVDSTNFKQVVQRL 522
           Y +  +  K   SYH +LHSIR                      +Y+VD  NF+ +VQ+L
Sbjct: 21  YSEETKGLKMPQSYHLSLHSIRKPQMKPCKKPIAPLPPTPPR--VYKVDPINFRDLVQKL 78

Query: 521 TSVPEFQP-------RRLQDVAPPPLNLSTPTTFSDHEIQTLPFHLTPSN-KSPFSATFR 366
           T  PE +P        RLQ VAPPPL+L+ PT +   +   +P  L PS  K+P SA ++
Sbjct: 79  TGAPEPEPVPEPQHQPRLQSVAPPPLDLAKPTLYG-RDFSAVPLQLLPSPAKTPLSALYQ 137

Query: 365 HLMNETVLDTKPAKLSDNFGTLMSPLGFSLSPASLAWCSFLLESPGTLSTLEPGTVL 195
            LM+E+ LD KP K+SD+   + S L  +LSP+S AWCSF L SPGTLS+LE GTVL
Sbjct: 138 ELMSES-LDVKPKKISDSLMAVSSSLELNLSPSSRAWCSFPLLSPGTLSSLEQGTVL 193


>ref|XP_002525296.1| conserved hypothetical protein [Ricinus communis]
           gi|223535454|gb|EEF37124.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  107 bits (267), Expect = 3e-21
 Identities = 73/181 (40%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
 Frame = -1

Query: 701 YQQTERKPKPSPSYHSALHSIRXXXXXXXXXXXXXXXXXXXXXKIYQVDSTNFKQVVQRL 522
           Y Q     K S S+HS+LHS+R                      +Y+VD  NF+ +VQ+L
Sbjct: 21  YPQEGNSLKASQSFHSSLHSVRKPYQVKPWKKPIAPLPPTPPR-VYKVDPINFRDLVQKL 79

Query: 521 TSVPE-------FQPRRLQDVAPPPLNLSTPTTFSDHEIQTL---PFHLTPSN-KSPFSA 375
           T  P+        Q +RLQ VAPPPL+L         E  T+   P  L PS   +PFSA
Sbjct: 80  TGAPDPSESQGNNQQQRLQRVAPPPLDLDKKPALFSREFATVSAAPLELLPSPVNTPFSA 139

Query: 374 TFRHLMNETVLDTKPAKLSDNFGTLMSPLGFSL-SPASLAWCSFLLESPGTLSTLEPGTV 198
            ++ LM++T+ D+KP K+SD+     S L F+L SP++  WCSF L SPGTLS+LE  TV
Sbjct: 140 LYQELMSDTLPDSKPRKVSDSV-MASSCLEFNLLSPSTHNWCSFPLLSPGTLSSLEQSTV 198

Query: 197 L 195
           L
Sbjct: 199 L 199


>emb|CAN77738.1| hypothetical protein VITISV_020689 [Vitis vinifera]
          Length = 222

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
 Frame = -1

Query: 569 IYQVDSTNFKQVVQRLTSVPEFQPRRLQDVAPPPLNLSTPTTFSDHEIQTLPFHLT--PS 396
           +Y+V+STNF++VVQRLT  P+ + +RL+ +APPPL L   +     +  T P  L+  P 
Sbjct: 105 VYRVNSTNFRKVVQRLTGAPKLKSQRLKSMAPPPLPLPVXSFLQSDDNITQPILLSGCPK 164

Query: 395 NKSPFSATFRHLMNETVLDTKPAKLSDNFGTLMSPLGFSLSPASLAWCSFLLESPGTLST 216
             +  + T+ HL+        P    D+     + L    SP+S AW SF   SPGTL  
Sbjct: 165 GAATPTTTYGHLL--------PGMFCDDSLMANTSLQICSSPSS-AWPSFPFLSPGTLFA 215

Query: 215 LEPGTVL 195
           LE GTVL
Sbjct: 216 LEQGTVL 222


>ref|XP_002320006.1| predicted protein [Populus trichocarpa] gi|222860779|gb|EEE98321.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
 Frame = -1

Query: 665 SYHSALHSIRXXXXXXXXXXXXXXXXXXXXXKIYQVDSTNFKQVVQRLTSVPEFQPR--- 495
           SYHS+LHSIR                      +Y+VD  NF+ +VQ+LT  P+ +P    
Sbjct: 4   SYHSSLHSIRRTQMKPWKKPIAPLPPTPPR--VYKVDPINFRDLVQKLTGAPKKEPEPEP 61

Query: 494 --RLQDVAPPPLNLSTPTTFS-DHEIQTLPFHLTPS-NKSPFSAT-FRHLMNETVLDTKP 330
             RLQ VAPPPL+L TPT F  + EI  +P  L PS  ++P SA+ ++ LM E+ LD KP
Sbjct: 62  QSRLQSVAPPPLDLFTPTLFGREREIAAVPLQLLPSPAQTPLSASLYQELMYES-LDAKP 120


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