BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035392
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   130   1e-28
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]         127   1e-27
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...   126   2e-27
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...   126   2e-27
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        124   7e-27

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/115 (51%), Positives = 77/115 (66%)
 Frame = -3

Query: 526  KLSPKYFWPFLVIEKIGNVAYKIQLPADAKVHPVFHVSLLKKCIGLNCPSSPTLPPINDQ 347
            KL  KY+ PF V+EK+G VAY++QLP +A +HPVFHVS LKK +G +    P LP +   
Sbjct: 841  KLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPD 900

Query: 346  GQFLVEPVAILDRKMVKKNNVAAVEILVQWSNTLPSEATWEDWDSLHSRFPQFHP 182
            GQ   EPVA+L R+M+ +NNVA  + L+ WSN  P+EATWED   +   FP F P
Sbjct: 901  GQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNFQP 955


>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
          Length = 394

 Score =  127 bits (319), Expect = 1e-27
 Identities = 60/125 (48%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
 Frame = -3

Query: 541 QTRFG-----KLSPKYFWPFLVIEKIGNVAYKIQLPADAKVHPVFHVSLLKKCIGLNCPS 377
           QT FG     KL  K++ PF VIEK+G VAY++QLP DA +HPVFHVS LKK +G     
Sbjct: 270 QTAFGIRGSLKLRSKFYGPFKVIEKVGQVAYRLQLPNDATIHPVFHVSQLKKHLGKRAIP 329

Query: 376 SPTLPPINDQGQFLVEPVAILDRKMVKKNNVAAVEILVQWSNTLPSEATWEDWDSLHSRF 197
            P LP +  +GQ   +P A+L R+M+ +N VA  + L+ W N  P++ATWED D + + F
Sbjct: 330 MPNLPSVGPEGQIKTQPTAVLQRRMMPRNGVAVTQWLILWENLGPTDATWEDADVIRNMF 389

Query: 196 PQFHP 182
           P F+P
Sbjct: 390 PTFNP 394


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/125 (48%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
 Frame = -3

Query: 541  QTRFG-----KLSPKYFWPFLVIEKIGNVAYKIQLPADAKVHPVFHVSLLKKCIGLNCPS 377
            QT FG     KL  K++ PF V+EKIG VAYK+QLP DA +HPVFHVS LKK +G     
Sbjct: 1389 QTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQLKKHLGQRAVP 1448

Query: 376  SPTLPPINDQGQFLVEPVAILDRKMVKKNNVAAVEILVQWSNTLPSEATWEDWDSLHSRF 197
               LP +   GQ   +PVA+L R+M+ +N VA  + L+ W N  P++ATWED   + S +
Sbjct: 1449 MSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATWEDAAVIQSMY 1508

Query: 196  PQFHP 182
            P FHP
Sbjct: 1509 PTFHP 1513


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1411

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/125 (48%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
 Frame = -3

Query: 541  QTRFG-----KLSPKYFWPFLVIEKIGNVAYKIQLPADAKVHPVFHVSLLKKCIGLNCPS 377
            QT FG     KL  K++ PF V+EKIG VAYK+QLP DA +HPVFHVS LKK +G     
Sbjct: 1287 QTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQLKKHLGQRAVP 1346

Query: 376  SPTLPPINDQGQFLVEPVAILDRKMVKKNNVAAVEILVQWSNTLPSEATWEDWDSLHSRF 197
               LP +   GQ   +PVA+L R+M+ +N VA  + L+ W N  P++ATWED   + S +
Sbjct: 1347 MSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATWEDAAVIQSMY 1406

Query: 196  PQFHP 182
            P FHP
Sbjct: 1407 PTFHP 1411


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  124 bits (312), Expect = 7e-27
 Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
 Frame = -3

Query: 541  QTRFG-----KLSPKYFWPFLVIEKIGNVAYKIQLPADAKVHPVFHVSLLKKCIGLNCPS 377
            QT FG     KL  K++ PF ++EK+G VAYK+QLP  + +HPVFHVS LKK IG     
Sbjct: 1462 QTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVP 1521

Query: 376  SPTLPPINDQGQFLVEPVAILDRKMVKKNNVAAVEILVQWSNTLPSEATWEDWDSLHSRF 197
               LP +   GQ   EPVA+L R+M+ +  VA  + LV W N  PSEATWED   + S F
Sbjct: 1522 MANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMF 1581

Query: 196  PQFHP 182
            P F+P
Sbjct: 1582 PSFNP 1586