BLASTX nr result

ID: Panax21_contig00035386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035386
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278046.2| PREDICTED: phytoene dehydrogenase-like [Viti...    92   4e-17
emb|CBI37843.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002521265.1| Phytoene dehydrogenase, putative [Ricinus co...    67   2e-09
ref|XP_002305531.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_004147077.1| PREDICTED: phytoene dehydrogenase-like [Cucu...    55   6e-06

>ref|XP_002278046.2| PREDICTED: phytoene dehydrogenase-like [Vitis vinifera]
          Length = 530

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/95 (52%), Positives = 61/95 (64%)
 Frame = +2

Query: 164 MLGIWKISPCFFSIEREGRISGFCCRAEDQQIQPNELQTNXXXXXXAVVVGSGWAGLAAA 343
           MLG W+++PC  S       SGFCCRA + Q   N ++         VVVGSGWAGL AA
Sbjct: 1   MLGCWRVTPCLSS----EYTSGFCCRANNLQTHVNGVENKKKKK--VVVVGSGWAGLGAA 54

Query: 344 HHLCKQEFDVTVLEGCYEFGSKKVSLTPDDMGIRG 448
           HHLCKQ F+VTVLEG  +  S+K+ L PDD+GI G
Sbjct: 55  HHLCKQGFEVTVLEGGNDPESRKM-LIPDDVGIHG 88


>emb|CBI37843.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/95 (52%), Positives = 61/95 (64%)
 Frame = +2

Query: 164 MLGIWKISPCFFSIEREGRISGFCCRAEDQQIQPNELQTNXXXXXXAVVVGSGWAGLAAA 343
           MLG W+++PC  S       SGFCCRA + Q   N ++         VVVGSGWAGL AA
Sbjct: 1   MLGCWRVTPCLSS----EYTSGFCCRANNLQTHVNGVENKKKKK--VVVVGSGWAGLGAA 54

Query: 344 HHLCKQEFDVTVLEGCYEFGSKKVSLTPDDMGIRG 448
           HHLCKQ F+VTVLEG  +  S+K+ L PDD+GI G
Sbjct: 55  HHLCKQGFEVTVLEGGNDPESRKM-LIPDDVGIHG 88


>ref|XP_002521265.1| Phytoene dehydrogenase, putative [Ricinus communis]
           gi|223539533|gb|EEF41121.1| Phytoene dehydrogenase,
           putative [Ricinus communis]
          Length = 530

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = +2

Query: 164 MLGIWKISPCFFSIEREGRISGFCCRAEDQQIQPNELQ-TNXXXXXXAVVVGSGWAGLAA 340
           ML  W+ +    ++ R  +    C  AE QQI  N     +       V+VGSGWAGL A
Sbjct: 1   MLSCWRFTLTPSTVNRRYKNGLSCKAAETQQIHVNNRDYKHSNKKKKVVIVGSGWAGLGA 60

Query: 341 AHHLCKQEFDVTVLEGCYEFGSKKVSLTPDDMGIRG 448
           AHHLC Q F+VTVLE    FGS      PDD+GI+G
Sbjct: 61  AHHLCNQGFNVTVLEDDV-FGS------PDDVGIQG 89


>ref|XP_002305531.1| predicted protein [Populus trichocarpa] gi|222848495|gb|EEE86042.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/80 (46%), Positives = 46/80 (57%)
 Frame = +2

Query: 209 REGRISGFCCRAEDQQIQPNELQTNXXXXXXAVVVGSGWAGLAAAHHLCKQEFDVTVLEG 388
           R+   SG   +A  +QI  +  + N       V+VGSGWAGL AA+HLC Q FDVTVL  
Sbjct: 21  RDKSRSGLSRKAATRQIHASNGEYNNNKKK-VVIVGSGWAGLGAAYHLCNQGFDVTVLGD 79

Query: 389 CYEFGSKKVSLTPDDMGIRG 448
            Y+FG       PDD+GI G
Sbjct: 80  GYDFGD------PDDVGIHG 93


>ref|XP_004147077.1| PREDICTED: phytoene dehydrogenase-like [Cucumis sativus]
           gi|449518113|ref|XP_004166088.1| PREDICTED: phytoene
           dehydrogenase-like [Cucumis sativus]
          Length = 533

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/48 (62%), Positives = 31/48 (64%)
 Frame = +2

Query: 305 VVVGSGWAGLAAAHHLCKQEFDVTVLEGCYEFGSKKVSLTPDDMGIRG 448
           VVVGSGWAGLAAA+HLC Q FD TVLE    FG        D  GIRG
Sbjct: 51  VVVGSGWAGLAAANHLCNQGFDTTVLEPSNNFGG------ADIHGIRG 92


Top