BLASTX nr result

ID: Panax21_contig00035381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035381
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              249   2e-64
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par...   232   2e-59
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   231   6e-59
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...   230   8e-59
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia...   226   2e-57

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  249 bits (636), Expect = 2e-64
 Identities = 120/159 (75%), Positives = 136/159 (85%), Gaps = 3/159 (1%)
 Frame = -1

Query: 469 MEESQTNSNIFSVRIVSIDYYMAPPIAGLDLCYSSFQGGKVKEVPVIRVYGSTPAGQKTC 290
           ME SQ ++ IFSVRIVS+DYYMAPPI  LD+CYSSFQGG VKEVPVIR+YGSTP GQKTC
Sbjct: 1   MENSQDDAKIFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTC 60

Query: 289 LHIHRALPYLYVPCSELSLQPDQEGNACTHALSLAIEKALKLKGNAGSKRQHVHGCSLVR 110
           LH+HRALPYLYVPC++L  Q  QE +  THA+SL +EKALKLKGNAGSKRQHVHGCSLVR
Sbjct: 61  LHVHRALPYLYVPCTDLMPQSPQEADTYTHAVSLGVEKALKLKGNAGSKRQHVHGCSLVR 120

Query: 109 ARKFYGYYSSEDLFAKILL---YYPQDVSRTANLLLGGA 2
           A+ FYGY+SSE+LF KI L   Y+P DVSR ANLLLGG+
Sbjct: 121 AKNFYGYHSSEELFVKIYLNISYHPHDVSRAANLLLGGS 159


>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
          Length = 1591

 Score =  232 bits (592), Expect = 2e-59
 Identities = 112/159 (70%), Positives = 134/159 (84%), Gaps = 3/159 (1%)
 Frame = -1

Query: 469 MEESQTNSNIFSVRIVSIDYYMAPPIAGLDLCYSSFQGGKVKEVPVIRVYGSTPAGQKTC 290
           M +SQ+ S +FSVRIVSIDYY+APPI GLD+ YSSFQGGKV EVPV+R+YGSTPAGQKTC
Sbjct: 1   MGDSQSESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTC 60

Query: 289 LHIHRALPYLYVPCSELSLQPDQE---GNACTHALSLAIEKALKLKGNAGSKRQHVHGCS 119
           +H+H  LPYLYVPCSE+ L  + +   G A  + +SLA+EKALKLKGN+GSKRQHVHG +
Sbjct: 61  VHVHGVLPYLYVPCSEILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYN 120

Query: 118 LVRARKFYGYYSSEDLFAKILLYYPQDVSRTANLLLGGA 2
           LVRA+K YGY+SSE+LF KI LYYPQD++R ANLLL GA
Sbjct: 121 LVRAKKLYGYHSSEELFIKIYLYYPQDITRAANLLLNGA 159


>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222413 [Cucumis sativus]
          Length = 2868

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/159 (69%), Positives = 133/159 (83%), Gaps = 3/159 (1%)
 Frame = -1

Query: 469 MEESQTNSNIFSVRIVSIDYYMAPPIAGLDLCYSSFQGGKVKEVPVIRVYGSTPAGQKTC 290
           M +SQ+ S +FSVRIVSIDYY+APPI GLD+ YSSFQGGKV EVPV+R+YGSTPAGQKTC
Sbjct: 1   MGDSQSESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTC 60

Query: 289 LHIHRALPYLYVPCSELSLQPDQE---GNACTHALSLAIEKALKLKGNAGSKRQHVHGCS 119
           +H+H  LPYLYVPCSE+ L  + +   G A  + +SLA+EKALKLKGN+GSKRQHVHG +
Sbjct: 61  VHVHGVLPYLYVPCSEILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYN 120

Query: 118 LVRARKFYGYYSSEDLFAKILLYYPQDVSRTANLLLGGA 2
           LVRA+K YGY+SSE+ F KI LYYPQD++R ANLLL GA
Sbjct: 121 LVRAKKLYGYHSSEEFFIKIYLYYPQDITRAANLLLNGA 159


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
           lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
           ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score =  230 bits (587), Expect = 8e-59
 Identities = 111/161 (68%), Positives = 132/161 (81%), Gaps = 5/161 (3%)
 Frame = -1

Query: 469 MEESQTNSNIFSVRIVSIDYYMAPPIAGLDLCYSSFQGGKVKEVPVIRVYGSTPAGQKTC 290
           M +SQ+ SN+FS+RIVSIDYYMA PI G D+CYSSFQGG+V EVPVIR+YGSTPAGQKTC
Sbjct: 1   MADSQSGSNVFSLRIVSIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTC 60

Query: 289 LHIHRALPYLYVPCSELSLQPDQEGNACTHALSLAIEKALKLKGNAGSKRQHVHGCSLVR 110
           LHIHRALPYLY+PCSE+ L+  +  +  T ALSL +EKALKLKGNA SKRQHVH C +VR
Sbjct: 61  LHIHRALPYLYIPCSEIPLEHHKGADGSTLALSLELEKALKLKGNAASKRQHVHDCEIVR 120

Query: 109 ARKFYGYYSSEDLFAKILL-----YYPQDVSRTANLLLGGA 2
           A+KFYGY+S+E+ F KI L     Y+P DV+R A+LLL GA
Sbjct: 121 AKKFYGYHSTEEAFVKIYLYPCNSYHPPDVARAASLLLAGA 161


>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
           gi|34330129|dbj|BAC82450.1| catalytic subunit of
           polymerase zeta [Arabidopsis thaliana]
           gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
           [Arabidopsis thaliana]
          Length = 1890

 Score =  226 bits (576), Expect = 2e-57
 Identities = 108/157 (68%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
 Frame = -1

Query: 469 MEESQTNSNIFSVRIVSIDYYMAPPIAGLDLCYSSFQGGKVKEVPVIRVYGSTPAGQKTC 290
           M +SQ+ SN+FS+RIVSIDYYMA PI G ++CYSSFQG +V EVPVIR+YGSTPAGQKTC
Sbjct: 1   MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60

Query: 289 LHIHRALPYLYVPCSELSLQPDQEGNACTHALSLAIEKALKLKGNAGSKRQHVHGCSLVR 110
           LHIHRALPYLY+PCSE+ L+  +  +  T ALSL +EKALKLKGNA SKRQH+H C +VR
Sbjct: 61  LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120

Query: 109 ARKFYGYYSSEDLFAKILL-YYPQDVSRTANLLLGGA 2
           A+KFYGY+S+E+ F KI L Y+P DV+R A+LLL GA
Sbjct: 121 AKKFYGYHSTEEAFVKIYLSYHPPDVARAASLLLAGA 157


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