BLASTX nr result

ID: Panax21_contig00035372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035372
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631864.1| PREDICTED: riboflavin biosynthesis protein R...   247   2e-63
emb|CAN60371.1| hypothetical protein VITISV_041263 [Vitis vinifera]   246   3e-63
ref|XP_002875837.1| predicted protein [Arabidopsis lyrata subsp....   238   9e-61
ref|XP_002325472.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60
ref|XP_002514838.1| riboflavin-specific deaminase, putative [Ric...   236   3e-60

>ref|XP_003631864.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis
           vinifera] gi|297735254|emb|CBI17616.3| unnamed protein
           product [Vitis vinifera]
          Length = 586

 Score =  247 bits (630), Expect = 2e-63
 Identities = 123/162 (75%), Positives = 141/162 (87%)
 Frame = -3

Query: 488 FSTPIICRASDNNGTNNSHTLDASYIKRAAALADKSAGFTSPHPNFGCVIATDGGRVVGE 309
           F +PIIC+A+ NN  N+ H LD+ +++RAA +ADKSAGFTSPHPNFGCVIAT  G+VVGE
Sbjct: 5   FPSPIICKATTNN--NHPHALDSFHVRRAAEIADKSAGFTSPHPNFGCVIAT-AGKVVGE 61

Query: 308 GYLHAQGTKPAEVLAVEAAGEYCRGATAYLNMESGDCHGDFTAVSALIKAGITRVVVGIR 129
           GYL+AQGTKPAEV AVEAAGE CRGATAYLNME GDCHGD TAVSAL+KAGITR VVGIR
Sbjct: 62  GYLYAQGTKPAEVQAVEAAGELCRGATAYLNMEPGDCHGDRTAVSALVKAGITRAVVGIR 121

Query: 128 HPLQHLRGNAICALRSERLQVDVLGEDLRSKTIEEALNPCLL 3
           HPLQHLR +A+ A+RSE LQVDVLGEDL+SK +EEAL  CL+
Sbjct: 122 HPLQHLRSHALRAMRSEGLQVDVLGEDLKSKIVEEALKSCLI 163


>emb|CAN60371.1| hypothetical protein VITISV_041263 [Vitis vinifera]
          Length = 587

 Score =  246 bits (629), Expect = 3e-63
 Identities = 123/162 (75%), Positives = 141/162 (87%)
 Frame = -3

Query: 488 FSTPIICRASDNNGTNNSHTLDASYIKRAAALADKSAGFTSPHPNFGCVIATDGGRVVGE 309
           F +PIIC+A+ NN  N+ H LD+ +++RAA +ADKSAGFTSPHPNFGCVIAT  G+VVGE
Sbjct: 5   FPSPIICKATTNN--NHPHALDSFHVRRAAEIADKSAGFTSPHPNFGCVIAT-AGKVVGE 61

Query: 308 GYLHAQGTKPAEVLAVEAAGEYCRGATAYLNMESGDCHGDFTAVSALIKAGITRVVVGIR 129
           GYL+AQGTKPAEV AVEAAGE CRGATAYLNME GDCHGD TAVSAL+KAGITR VVGIR
Sbjct: 62  GYLYAQGTKPAEVQAVEAAGELCRGATAYLNMEPGDCHGDRTAVSALVKAGITRXVVGIR 121

Query: 128 HPLQHLRGNAICALRSERLQVDVLGEDLRSKTIEEALNPCLL 3
           HPLQHLR +A+ A+RSE LQVDVLGEDL+SK +EEAL  CL+
Sbjct: 122 HPLQHLRSHALRAMRSEGLQVDVLGEDLKSKIVEEALKSCLI 163


>ref|XP_002875837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321675|gb|EFH52096.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 579

 Score =  238 bits (607), Expect = 9e-61
 Identities = 118/171 (69%), Positives = 139/171 (81%), Gaps = 2/171 (1%)
 Frame = -3

Query: 509 MGFSLGFFSTPIICRASDNNGTN--NSHTLDASYIKRAAALADKSAGFTSPHPNFGCVIA 336
           M  S    S+P+ICRA+ +NG N  N H +DA++I+RAA LA+ SAG TSPHPNFGCVIA
Sbjct: 1   MALSFRICSSPLICRATLSNGDNGRNHHAIDAAFIRRAADLAEMSAGLTSPHPNFGCVIA 60

Query: 335 TDGGRVVGEGYLHAQGTKPAEVLAVEAAGEYCRGATAYLNMESGDCHGDFTAVSALIKAG 156
           T  G+V GEGYL+AQGTKPAE LAVEAAGE+ RG+TAYLNME GDCHGD TAVSAL++AG
Sbjct: 61  TSSGKVAGEGYLYAQGTKPAEALAVEAAGEFSRGSTAYLNMEPGDCHGDHTAVSALVQAG 120

Query: 155 ITRVVVGIRHPLQHLRGNAICALRSERLQVDVLGEDLRSKTIEEALNPCLL 3
           I RVVVGIRHPLQHLRG+AI  LRS+ ++V+VLGED  SK +EEA   CLL
Sbjct: 121 IDRVVVGIRHPLQHLRGSAIRELRSQGIEVNVLGEDFESKVLEEARKSCLL 171


>ref|XP_002325472.1| predicted protein [Populus trichocarpa] gi|222862347|gb|EEE99853.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  237 bits (604), Expect = 2e-60
 Identities = 117/165 (70%), Positives = 142/165 (86%), Gaps = 2/165 (1%)
 Frame = -3

Query: 491 FFSTPIICR--ASDNNGTNNSHTLDASYIKRAAALADKSAGFTSPHPNFGCVIATDGGRV 318
           F+S+PI+C+  AS++N ++ +H+LDA+YIKRAA +AD SAGF+SPHPNFGCVIAT  G V
Sbjct: 11  FYSSPILCKSIASNSNHSHAAHSLDAAYIKRAAQIADNSAGFSSPHPNFGCVIATTSGIV 70

Query: 317 VGEGYLHAQGTKPAEVLAVEAAGEYCRGATAYLNMESGDCHGDFTAVSALIKAGITRVVV 138
            GEGYL+AQGTK AEVLAVEAAG + +G+TAYLNME GDCHGD +AVSAL++AGITRVVV
Sbjct: 71  AGEGYLYAQGTKAAEVLAVEAAGGFSKGSTAYLNMEPGDCHGDQSAVSALVQAGITRVVV 130

Query: 137 GIRHPLQHLRGNAICALRSERLQVDVLGEDLRSKTIEEALNPCLL 3
           GIRHPLQHL GNAI +LR + LQVDV+GEDL+SK +EEA   CLL
Sbjct: 131 GIRHPLQHLHGNAIRSLRGQGLQVDVVGEDLKSKIMEEARKSCLL 175


>ref|XP_002514838.1| riboflavin-specific deaminase, putative [Ricinus communis]
           gi|223545889|gb|EEF47392.1| riboflavin-specific
           deaminase, putative [Ricinus communis]
          Length = 600

 Score =  236 bits (602), Expect = 3e-60
 Identities = 121/177 (68%), Positives = 144/177 (81%), Gaps = 8/177 (4%)
 Frame = -3

Query: 509 MGFSLG---FFSTPIICRA-----SDNNGTNNSHTLDASYIKRAAALADKSAGFTSPHPN 354
           M FSL    + S+P+IC A     ++N+  N+SH  DA++IKRAA LADKSAG TSPHPN
Sbjct: 1   MSFSLATNCYCSSPVICNAILNYNNNNHRNNHSHCSDAAFIKRAAELADKSAGCTSPHPN 60

Query: 353 FGCVIATDGGRVVGEGYLHAQGTKPAEVLAVEAAGEYCRGATAYLNMESGDCHGDFTAVS 174
           FGCVIAT  G V GEGYL+AQGTKPAEV AVEAAGE+ +GATAYLN+E GDCHGD TAVS
Sbjct: 61  FGCVIATATGNVAGEGYLYAQGTKPAEVQAVEAAGEWSKGATAYLNLEPGDCHGDHTAVS 120

Query: 173 ALIKAGITRVVVGIRHPLQHLRGNAICALRSERLQVDVLGEDLRSKTIEEALNPCLL 3
           +L++AGITRVVVGIRHPL+HL+GNA+ ALR+  LQV+VLGEDL+SK IE+A   CLL
Sbjct: 121 SLVQAGITRVVVGIRHPLRHLQGNAVHALRNHGLQVEVLGEDLQSKIIEDARKSCLL 177


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