BLASTX nr result

ID: Panax21_contig00035351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035351
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...   284   7e-75
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   281   4e-74
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   281   4e-74
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...   280   1e-73
ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vit...   275   5e-72

>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355500175|gb|AES81378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  284 bits (727), Expect = 7e-75
 Identities = 131/161 (81%), Positives = 150/161 (93%)
 Frame = -3

Query: 585 AYASAGRFEEAAKARKMLRDRGMKKETGLSWVEEGNRVHTFMAGDRSHSKSMEIYKKLDE 406
           AYA+AGR+EEAAKARKM+RDRG+KKETGLSWVEEGNR+HTF AGDRSH+KS+EIY KLDE
Sbjct: 436 AYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDE 495

Query: 405 LEDEMERAGYVADTSFVLQEIDGSEKKLAIRYHSERLAIAFALITFPSERPIRVMKNLRV 226
           L +EM++AGYVADTSFVL+E+DG EK  +IRYHSERLAIAF  ITFP  +PIRVMKNLRV
Sbjct: 496 LGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRV 555

Query: 225 CGDCHTAIKIMSKCSGRVIILRDNNRFHRFDDGKCSCGDYW 103
           CGDCHTAIK +SKC+GRVII+RDNNRFHRF+DGKC+CGDYW
Sbjct: 556 CGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596


>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  281 bits (720), Expect = 4e-74
 Identities = 131/161 (81%), Positives = 147/161 (91%)
 Frame = -3

Query: 585 AYASAGRFEEAAKARKMLRDRGMKKETGLSWVEEGNRVHTFMAGDRSHSKSMEIYKKLDE 406
           AYA+AGR+EEAA+ RKMLRDRG+KKETGLSWVEEGN+VHTF AGDRSH+K +EIY+KL+E
Sbjct: 438 AYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEE 497

Query: 405 LEDEMERAGYVADTSFVLQEIDGSEKKLAIRYHSERLAIAFALITFPSERPIRVMKNLRV 226
           LE+EME+AGYVADTSFVL+ +DG EK   IRYHSERLAIAF LITFP  RPIRVMKNLRV
Sbjct: 498 LEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRV 557

Query: 225 CGDCHTAIKIMSKCSGRVIILRDNNRFHRFDDGKCSCGDYW 103
           CGDCH AIK MSKC GRV+I+RDNNRFHRF+DGKCSCGDYW
Sbjct: 558 CGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  281 bits (720), Expect = 4e-74
 Identities = 131/161 (81%), Positives = 147/161 (91%)
 Frame = -3

Query: 585 AYASAGRFEEAAKARKMLRDRGMKKETGLSWVEEGNRVHTFMAGDRSHSKSMEIYKKLDE 406
           AYA+AGR+EEAA+ RKMLRDRG+KKETGLSWVEEGN+VHTF AGDRSH+K +EIY+KL+E
Sbjct: 438 AYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEE 497

Query: 405 LEDEMERAGYVADTSFVLQEIDGSEKKLAIRYHSERLAIAFALITFPSERPIRVMKNLRV 226
           LE+EME+AGYVADTSFVL+ +DG EK   IRYHSERLAIAF LITFP  RPIRVMKNLRV
Sbjct: 498 LEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRV 557

Query: 225 CGDCHTAIKIMSKCSGRVIILRDNNRFHRFDDGKCSCGDYW 103
           CGDCH AIK MSKC GRV+I+RDNNRFHRF+DGKCSCGDYW
Sbjct: 558 CGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598


>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  280 bits (716), Expect = 1e-73
 Identities = 130/161 (80%), Positives = 148/161 (91%)
 Frame = -3

Query: 585 AYASAGRFEEAAKARKMLRDRGMKKETGLSWVEEGNRVHTFMAGDRSHSKSMEIYKKLDE 406
           AYA+AGR+EEAA+ARKM+RD+G+KKETGLSWVEEGNRVHTF AGDRSH K+ EIY+KL+E
Sbjct: 422 AYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEE 481

Query: 405 LEDEMERAGYVADTSFVLQEIDGSEKKLAIRYHSERLAIAFALITFPSERPIRVMKNLRV 226
           L +EM +AGYVADTSFVL+E+DG EK   IRYHSERLAIAF LITFP E PIRVMKNLRV
Sbjct: 482 LGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRV 541

Query: 225 CGDCHTAIKIMSKCSGRVIILRDNNRFHRFDDGKCSCGDYW 103
           CGDCHTAIK +SKC+GRVII+RDNNRFHRF+DGKC+CGDYW
Sbjct: 542 CGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582


>ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
          Length = 977

 Score =  275 bits (702), Expect = 5e-72
 Identities = 127/159 (79%), Positives = 143/159 (89%)
 Frame = -3

Query: 579 ASAGRFEEAAKARKMLRDRGMKKETGLSWVEEGNRVHTFMAGDRSHSKSMEIYKKLDELE 400
           ++AGR+EEAA+ARKMLRD+G+KKETGLSWVEEGNR+HTF AGDRSH  + +IYKKL+EL 
Sbjct: 313 SAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELG 372

Query: 399 DEMERAGYVADTSFVLQEIDGSEKKLAIRYHSERLAIAFALITFPSERPIRVMKNLRVCG 220
           +EMERAGY+ADTSFVLQE+DG EK   IRYHSERLAIAF LI+FP ERPIRVMKNLRVCG
Sbjct: 373 EEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVMKNLRVCG 432

Query: 219 DCHTAIKIMSKCSGRVIILRDNNRFHRFDDGKCSCGDYW 103
           DCHTAIK MSKC GR II+RDNNRFHRF+DG CSC DYW
Sbjct: 433 DCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471


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