BLASTX nr result
ID: Panax21_contig00035344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00035344
(393 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containi... 151 1e-36
ref|XP_002525572.1| pentatricopeptide repeat-containing protein,... 139 1e-32
gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|... 120 9e-27
ref|NP_179518.1| pentatricopeptide repeat-containing protein [Ar... 120 9e-27
ref|XP_002886049.1| pentatricopeptide repeat-containing protein ... 117 1e-25
>ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 151 bits (382), Expect(2) = 1e-36
Identities = 70/110 (63%), Positives = 93/110 (84%)
Frame = -2
Query: 392 KMLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGL 213
K+L+EMKY GI PDVVAYTI+I+SLCK+SLLK ATS+ FKM QMG+ DS SV+ ++DG
Sbjct: 242 KLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGY 301
Query: 212 CKMGDSNKAIDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMIE 63
CK+G S +A+D+L++F+L PNI+++NSFISKLCTDGNM A+ +FQ+M E
Sbjct: 302 CKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCE 351
Score = 26.6 bits (57), Expect(2) = 1e-36
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3
Query: 61 LLPNCCSHTTIIGGYAK 11
L+P+C S+TT++ GY K
Sbjct: 354 LIPDCFSYTTMMAGYCK 370
Score = 60.8 bits (146), Expect = 1e-07
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Frame = -2
Query: 392 KMLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGL 213
K L +M GI P V YT+LI+S CK +++A LF +M G+ PD S L++G
Sbjct: 379 KYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438
Query: 212 CKMGDSNKAIDILKIF---SLPPNIYIYNSFISKLCTDGNMAAASNIFQEM 69
K G KA ++L + + P++ YN I L G + A +I E+
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDEL 489
Score = 59.3 bits (142), Expect(2) = 1e-07
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = -2
Query: 377 MKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGLCKMGD 198
++ + ++P++ + I+ LC + A +F M +MG+ PD S T ++ G CK+ D
Sbjct: 314 LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKD 373
Query: 197 SNKAIDILKIF---SLPPNIYIYNSFISKLCTDGNMAAASNIFQEMI 66
+ A+ L + P++ Y I C GNM A +FQ MI
Sbjct: 374 ISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMI 420
Score = 21.2 bits (43), Expect(2) = 1e-07
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 61 LLPNCCSHTTIIGGYAK 11
L+P+ S+ T++ GY K
Sbjct: 424 LVPDVVSYNTLMNGYGK 440
Score = 54.7 bits (130), Expect = 8e-06
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = -2
Query: 389 MLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGLC 210
+L E+ G +PDVV +T +I + A LFF M + + PD + + L++G C
Sbjct: 485 ILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYC 544
Query: 209 K---MGDSNKAIDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMIE 63
+ M ++N + L ++ +YNS I C+ GN+ A ++ MIE
Sbjct: 545 RTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIE 596
>ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535151|gb|EEF36831.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 687
Score = 139 bits (349), Expect(2) = 1e-32
Identities = 68/111 (61%), Positives = 88/111 (79%)
Frame = -2
Query: 392 KMLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGL 213
K+L+EMK YGI DV+AYTI+I++LCKIS +KVATSL FKM GI+ DS SV+ +IDG
Sbjct: 275 KILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGY 334
Query: 212 CKMGDSNKAIDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMIEF 60
CK G S+KAI++L F++ PNI++Y+SF++KLC DGNM AS FQEM EF
Sbjct: 335 CKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEF 385
Score = 25.8 bits (55), Expect(2) = 1e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 61 LLPNCCSHTTIIGGYAK 11
L P+C +T IIGGY K
Sbjct: 387 LYPDCFCYTIIIGGYCK 403
Score = 68.9 bits (167), Expect = 4e-10
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Frame = -2
Query: 386 LVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGLCK 207
L EM +GI P V YT+LIN+ CK + +A L +M G+ PD + CLIDG K
Sbjct: 414 LGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGK 473
Query: 206 MGDSNKA---IDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMI 66
G KA +DI++ + P+ YN+ I L G A +I E+I
Sbjct: 474 KGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELI 523
Score = 68.6 bits (166), Expect = 5e-10
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Frame = -2
Query: 377 MKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGLCKMGD 198
+ ++ + P++ Y+ + LCK + A+ F +M + G+ PD T +I G CK+GD
Sbjct: 347 LNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGD 406
Query: 197 SNKAI----DILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMI 66
NKA ++LK F + P++ Y I+ C G+MA A + Q M+
Sbjct: 407 INKAFQYLGEMLK-FGITPSVTTYTLLINACCKSGDMAMAEYLLQRMM 453
Score = 55.5 bits (132), Expect = 4e-06
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Frame = -2
Query: 389 MLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGLC 210
+L E+ G++PDV+ +T +I+ K + A ++ M + + PD + + L++G C
Sbjct: 518 ILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYC 577
Query: 209 K---MGDSNKAIDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMIE 63
+ M ++N + L P++ +YN+ I C+ GNM AA N+ MI+
Sbjct: 578 RARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMID 629
Score = 55.1 bits (131), Expect = 6e-06
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -2
Query: 392 KMLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGL 213
K EM +G+ PD YTI+I CK+ + A +M + GITP + T LI+
Sbjct: 377 KTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINAC 436
Query: 212 CKMGDSNKAIDILK---IFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEM 69
CK GD A +L+ + L P++ +N I G + A + M
Sbjct: 437 CKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIM 487
>gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|BAD94048.1|
putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible
protein [Arabidopsis thaliana]
Length = 693
Score = 120 bits (301), Expect(2) = 9e-27
Identities = 55/110 (50%), Positives = 80/110 (72%)
Frame = -2
Query: 392 KMLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGL 213
++L+ MK+YGI PD+VA+T+ I+ LCK LK ATS+ FK+ GI+ DS SV+ +IDG
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 212 CKMGDSNKAIDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMIE 63
CK+G +AI ++ F L PNI++Y+SF+S +C+ G+M AS IFQE+ E
Sbjct: 352 CKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Score = 24.6 bits (52), Expect(2) = 9e-27
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 61 LLPNCCSHTTIIGGY 17
LLP+C +TT+I GY
Sbjct: 404 LLPDCVCYTTMIDGY 418
>ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g19280 gi|3135258|gb|AAC16458.1| putative
salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 120 bits (301), Expect(2) = 9e-27
Identities = 55/110 (50%), Positives = 80/110 (72%)
Frame = -2
Query: 392 KMLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGL 213
++L+ MK+YGI PD+VA+T+ I+ LCK LK ATS+ FK+ GI+ DS SV+ +IDG
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 212 CKMGDSNKAIDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMIE 63
CK+G +AI ++ F L PNI++Y+SF+S +C+ G+M AS IFQE+ E
Sbjct: 352 CKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Score = 24.6 bits (52), Expect(2) = 9e-27
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 61 LLPNCCSHTTIIGGY 17
LLP+C +TT+I GY
Sbjct: 404 LLPDCVCYTTMIDGY 418
>ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331889|gb|EFH62308.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 755
Score = 117 bits (293), Expect(2) = 1e-25
Identities = 54/110 (49%), Positives = 79/110 (71%)
Frame = -2
Query: 392 KMLVEMKYYGINPDVVAYTILINSLCKISLLKVATSLFFKMGQMGITPDSGSVTCLIDGL 213
++L+ MK YGI PD+VA+T+ I+ LCK L+ ATS+ FK+ GI+ DS SV+ +IDG
Sbjct: 359 ELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGF 418
Query: 212 CKMGDSNKAIDILKIFSLPPNIYIYNSFISKLCTDGNMAAASNIFQEMIE 63
CK+G +AI ++ F L PNI++Y+SF+S +C+ G+M AS IFQE+ E
Sbjct: 419 CKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 468
Score = 24.3 bits (51), Expect(2) = 1e-25
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 61 LLPNCCSHTTIIGGY 17
LLP+C +TT+I GY
Sbjct: 471 LLPDCYCYTTMIDGY 485