BLASTX nr result

ID: Panax21_contig00035343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035343
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31361.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s...    97   1e-18
emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera]    97   1e-18
ref|XP_002526400.1| queuine tRNA-ribosyltransferase, putative [R...    92   4e-17
ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14

>emb|CBI31361.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = -1

Query: 262 IQCSSLISLEGLSLKTMSYIGGLHEMLGLREYAFAAVPRDSVVCLPECNSSNKIEASFDN 83
           +Q S L  L+G+S KT+S IGGLH+MLGL EY FAAVPRDS+VCLPEC+S+NKI ASF+ 
Sbjct: 60  LQMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFET 119

Query: 82  PSGFRLV 62
           PSG RL+
Sbjct: 120 PSGRRLI 126


>ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis
           vinifera]
          Length = 399

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = -1

Query: 262 IQCSSLISLEGLSLKTMSYIGGLHEMLGLREYAFAAVPRDSVVCLPECNSSNKIEASFDN 83
           +Q S L  L+G+S KT+S IGGLH+MLGL EY FAAVPRDS+VCLPEC+S+NKI ASF+ 
Sbjct: 60  LQMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFET 119

Query: 82  PSGFRLV 62
           PSG RL+
Sbjct: 120 PSGRRLI 126


>emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera]
          Length = 383

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = -1

Query: 262 IQCSSLISLEGLSLKTMSYIGGLHEMLGLREYAFAAVPRDSVVCLPECNSSNKIEASFDN 83
           +Q S L  L+G+S KT+S IGGLH+MLGL EY FAAVPRDS+VCLPEC+S+NKI ASF+ 
Sbjct: 60  LQMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFET 119

Query: 82  PSGFRLV 62
           PSG RL+
Sbjct: 120 PSGRRLI 126


>ref|XP_002526400.1| queuine tRNA-ribosyltransferase, putative [Ricinus communis]
           gi|223534262|gb|EEF35976.1| queuine
           tRNA-ribosyltransferase, putative [Ricinus communis]
          Length = 406

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/73 (58%), Positives = 55/73 (75%)
 Frame = -1

Query: 280 YHKFSCIQCSSLISLEGLSLKTMSYIGGLHEMLGLREYAFAAVPRDSVVCLPECNSSNKI 101
           Y   + +QCS L  LEG+S KT+S+IGGLH+M+GL + AF AVPRDS+ CLPEC S+NK 
Sbjct: 89  YPHSALLQCSPLHFLEGVSRKTISHIGGLHQMVGLHDSAFVAVPRDSIQCLPECGSTNKF 148

Query: 100 EASFDNPSGFRLV 62
            ASF+ P G RL+
Sbjct: 149 GASFETPCGRRLI 161


>ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|222844415|gb|EEE81962.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -1

Query: 490 DAYKFLKMMLDAGCPPNHVTDTTLDFLEREIEKMRYQKASIKR 362
           DAYKFLKMMLDAGC PNHVTDTTLDFL +EIEK+RYQKASI R
Sbjct: 592 DAYKFLKMMLDAGCLPNHVTDTTLDFLAKEIEKLRYQKASIMR 634


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