BLASTX nr result

ID: Panax21_contig00035341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035341
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 4...   307   2e-81
ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|2...   302   6e-80
gb|ABK94871.1| unknown [Populus trichocarpa]                          302   6e-80
ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 4...   300   3e-79
ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   300   3e-79

>ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 43-like [Glycine max]
          Length = 1018

 Score =  307 bits (786), Expect = 2e-81
 Identities = 162/266 (60%), Positives = 199/266 (74%), Gaps = 3/266 (1%)
 Frame = +2

Query: 2    NDKGEVQMAAAGVLANLPKSEISLTKKLIELDGLRAIVDILRSGTIEAQENALSALFRFT 181
            +D  +VQMAAAG+LANLPKSE  LT +LI+L GL AI+ IL++GT+EA+ENALSALFRFT
Sbjct: 738  DDNDDVQMAAAGLLANLPKSERELTMELIDLGGLDAILSILKNGTMEAKENALSALFRFT 797

Query: 182  DPTNLESQKIVVEQGAYPLLVDFLKVGSVTAKARAAALIGDLSMRSLELTVVSKRAG--- 352
            DPTN+ESQ  +V++G YPLLV+FL  GSVTAKARAAA IGDLSM + +LT VSK  G   
Sbjct: 798  DPTNIESQHDLVKRGLYPLLVNFLNTGSVTAKARAAAFIGDLSMSTPKLTAVSKSTGCTR 857

Query: 353  FWCFCGSRVPKCQAHGGICSVNKSFCLLEANALPELVRLLQEKTHETAYEAIQTLSTLFA 532
            +WCF  S+VP C AHG +CSV+ +FCLLEANALP L+RLL  + H TAYEAIQTLSTL  
Sbjct: 858  WWCFRPSKVPLCSAHGSVCSVSSTFCLLEANALPGLIRLLHGEVHATAYEAIQTLSTLVL 917

Query: 533  EECPHRGAKTLHENGAIVHIFEILTWGXXXXXXXXXXXXXXXFMSKEMVEIYGWKARIPL 712
            E+ P RGA+ LHE+ A+  + EIL WG               F+SKEMVE YG +AR+ L
Sbjct: 918  EDFPQRGARVLHESNAMRPLLEILNWGTDSLKSEAIGLLEKVFVSKEMVEYYGTRARLSL 977

Query: 713  VQLTGRSFHEDGRLQRKAARVLLLIE 790
            + LTG + + DG L+RKAARVL L+E
Sbjct: 978  LGLTGITVYGDGHLRRKAARVLSLLE 1003


>ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|222863699|gb|EEF00830.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  302 bits (774), Expect = 6e-80
 Identities = 159/263 (60%), Positives = 193/263 (73%)
 Frame = +2

Query: 2    NDKGEVQMAAAGVLANLPKSEISLTKKLIELDGLRAIVDILRSGTIEAQENALSALFRFT 181
            +DK +VQMAAAG+LANLPKSE+S+T KLI+LDGL A++ I+R+GT+EA+ENALSALFRFT
Sbjct: 755  DDKSDVQMAAAGLLANLPKSEVSVTTKLIDLDGLNALIKIIRTGTMEAKENALSALFRFT 814

Query: 182  DPTNLESQKIVVEQGAYPLLVDFLKVGSVTAKARAAALIGDLSMRSLELTVVSKRAGFWC 361
            DP N E+Q+IVVEQGAYPL V+ L  GSV AKARAAALIGDLS  S +L VVSK  G WC
Sbjct: 815  DPANPETQRIVVEQGAYPLFVNLLTTGSVMAKARAAALIGDLSRSSPKLVVVSKATGCWC 874

Query: 362  FCGSRVPKCQAHGGICSVNKSFCLLEANALPELVRLLQEKTHETAYEAIQTLSTLFAEEC 541
            F  +R   C AHGGICSV  +FCL+EA ALP LV+LLQ + H  A+EAIQTLSTL  E  
Sbjct: 875  FRPTRPHLCPAHGGICSVKTTFCLIEATALPVLVKLLQGEVHVIAHEAIQTLSTLVQEGS 934

Query: 542  PHRGAKTLHENGAIVHIFEILTWGXXXXXXXXXXXXXXXFMSKEMVEIYGWKARIPLVQL 721
            P+RGA  LHE  AI  + +I TWG               F+S+EMVE YG  AR+ LV +
Sbjct: 935  PNRGANVLHEADAIKPVLDIFTWGTDSLKEEALGLLEKVFLSREMVEHYGPSARLILVGM 994

Query: 722  TGRSFHEDGRLQRKAARVLLLIE 790
             GR+ HED R+ R+ A+VL L+E
Sbjct: 995  PGRNGHEDSRMGRRVAKVLSLLE 1017


>gb|ABK94871.1| unknown [Populus trichocarpa]
          Length = 660

 Score =  302 bits (774), Expect = 6e-80
 Identities = 159/263 (60%), Positives = 193/263 (73%)
 Frame = +2

Query: 2    NDKGEVQMAAAGVLANLPKSEISLTKKLIELDGLRAIVDILRSGTIEAQENALSALFRFT 181
            +DK +VQMAAAG+LANLPKSE+S+T KLI+LDGL A++ I+R+GT+EA+ENALSALFRFT
Sbjct: 383  DDKSDVQMAAAGLLANLPKSEVSVTTKLIDLDGLNALIKIIRTGTMEAKENALSALFRFT 442

Query: 182  DPTNLESQKIVVEQGAYPLLVDFLKVGSVTAKARAAALIGDLSMRSLELTVVSKRAGFWC 361
            DP N E+Q+IVVEQGAYPL V+ L  GSV AKARAAALIGDLS  S +L VVSK  G WC
Sbjct: 443  DPANPETQRIVVEQGAYPLFVNLLTTGSVMAKARAAALIGDLSRSSPKLVVVSKATGCWC 502

Query: 362  FCGSRVPKCQAHGGICSVNKSFCLLEANALPELVRLLQEKTHETAYEAIQTLSTLFAEEC 541
            F  +R   C AHGGICSV  +FCL+EA ALP LV+LLQ + H  A+EAIQTLSTL  E  
Sbjct: 503  FRPTRPHLCPAHGGICSVKTTFCLIEATALPVLVKLLQGEVHVIAHEAIQTLSTLVQEGS 562

Query: 542  PHRGAKTLHENGAIVHIFEILTWGXXXXXXXXXXXXXXXFMSKEMVEIYGWKARIPLVQL 721
            P+RGA  LHE  AI  + +I TWG               F+S+EMVE YG  AR+ LV +
Sbjct: 563  PNRGANVLHEADAIKPVLDIFTWGTDSLKEEALGLLEKVFLSREMVEHYGPSARLILVGM 622

Query: 722  TGRSFHEDGRLQRKAARVLLLIE 790
             GR+ HED R+ R+ A+VL L+E
Sbjct: 623  PGRNGHEDSRMGRRVAKVLSLLE 645


>ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 44-like [Glycine max]
          Length = 1014

 Score =  300 bits (768), Expect = 3e-79
 Identities = 159/262 (60%), Positives = 190/262 (72%)
 Frame = +2

Query: 5    DKGEVQMAAAGVLANLPKSEISLTKKLIELDGLRAIVDILRSGTIEAQENALSALFRFTD 184
            +   VQ+AAAG+LANLPKSE  LT KLIEL GL AI+ IL++G +EA+ENAL+ALFRFTD
Sbjct: 738  ENANVQIAAAGLLANLPKSERELTMKLIELGGLDAIISILKTGKMEAKENALTALFRFTD 797

Query: 185  PTNLESQKIVVEQGAYPLLVDFLKVGSVTAKARAAALIGDLSMRSLELTVVSKRAGFWCF 364
            PTN+ESQ+ +V++G YPLLVDFL  GSVTAKARAAA IGDLSM + +LTVV K  G W F
Sbjct: 798  PTNIESQRDLVKRGIYPLLVDFLNTGSVTAKARAAAFIGDLSMSTPKLTVVPKPTGCWLF 857

Query: 365  CGSRVPKCQAHGGICSVNKSFCLLEANALPELVRLLQEKTHETAYEAIQTLSTLFAEECP 544
              SRVP C AHG +CSVN +FCLLEA ALP L++LL  + H TA EAIQTLSTL  E+ P
Sbjct: 858  RSSRVPLCSAHGSVCSVNTTFCLLEAKALPGLIKLLHGEVHATACEAIQTLSTLVLEDFP 917

Query: 545  HRGAKTLHENGAIVHIFEILTWGXXXXXXXXXXXXXXXFMSKEMVEIYGWKARIPLVQLT 724
             RGA+ LHE  AI  I +IL WG               F+SKEMVE YG  AR  L+ LT
Sbjct: 918  QRGARVLHEYNAIRSIMDILNWGTDSLKAEALGLLEKVFVSKEMVEYYGTTARSRLIGLT 977

Query: 725  GRSFHEDGRLQRKAARVLLLIE 790
            G + + DG L+RKAA+VL L+E
Sbjct: 978  GMNIYGDGHLRRKAAKVLSLLE 999


>ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223533304|gb|EEF35056.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 1017

 Score =  300 bits (768), Expect = 3e-79
 Identities = 158/264 (59%), Positives = 194/264 (73%), Gaps = 1/264 (0%)
 Frame = +2

Query: 2    NDKGEVQMAAAGVLANLPKSEISLTKKLIELDGLRAIVDILRSGTIEAQENALSALFRFT 181
            +DK +VQ AAAG+L+NLPKSE+ LT KLIELDGL A++ ++R+GT+EA+ENALSALFRFT
Sbjct: 739  DDKSDVQKAAAGLLSNLPKSEVPLTMKLIELDGLNALITLIRTGTMEAKENALSALFRFT 798

Query: 182  DPTNLESQKIVVEQGAYPLLVDFLKVGSVTAKARAAALIGDLSMRSLELTVVSKRAGFWC 361
            DP N+ESQ+IVVEQGAYP+LV+ L+ GSV AKARAAALIGDLSM S +L VV K   FWC
Sbjct: 799  DPANIESQRIVVEQGAYPMLVNLLRTGSVMAKARAAALIGDLSMSSPKLVVVPKPTCFWC 858

Query: 362  FCGSRVPKCQAHGGICSVNKSFCLLEANALPELVRLLQEKTHETAYEAIQTLSTLFAEEC 541
            F  +R   C  HGGICSV  +FCL+EANALP LV LL  +   TA+EAIQTLSTL    C
Sbjct: 859  FRPTRPHLCPVHGGICSVKTTFCLMEANALPALVELLHGEVDATAHEAIQTLSTLVQHGC 918

Query: 542  PHRGAKTLHENGAIVHIFEILTWGXXXXXXXXXXXXXXXFMSKEMVEIYGWKARIPLVQL 721
            P RGA  LHE+ AI  + +IL+WG               F+SKE+V+ Y   AR+ LV L
Sbjct: 919  PSRGANALHEHDAIKPVVDILSWGTNSLKEEALGLLEKVFLSKEVVDYYKSAARLRLVSL 978

Query: 722  TGRSFHED-GRLQRKAARVLLLIE 790
            TG++ HED  ++ RKAA VLLL+E
Sbjct: 979  TGQNVHEDNSQIGRKAASVLLLLE 1002


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