BLASTX nr result

ID: Panax21_contig00035306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035306
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]           243   1e-62
emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifo...   170   1e-40
ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|...   116   2e-34
ref|YP_001312258.1| hypothetical protein CYtaCp093 [Cycas taitun...   149   2e-34
ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago ...   128   4e-28

>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
          Length = 265

 Score =  243 bits (620), Expect = 1e-62
 Identities = 122/127 (96%), Positives = 123/127 (96%)
 Frame = -3

Query: 408 SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF 229
           SPGGILNALATALHGS RT PSIHRLRLGLLG LIPFAPLAFVSQCQCRPSRVLSPLVFF
Sbjct: 3   SPGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFF 62

Query: 228 PISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 49
           PIS HFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL
Sbjct: 63  PISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 122

Query: 48  PRLLAQS 28
           PRLLAQ+
Sbjct: 123 PRLLAQN 129


>emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifolia]
          Length = 84

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = -3

Query: 411 YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 232
           YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF
Sbjct: 2   YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 61

Query: 231 FPISTHFTAPPEIPSAPTVLQLG 163
           FPISTHFTAPPEIPSAPTVLQLG
Sbjct: 62  FPISTHFTAPPEIPSAPTVLQLG 84


>ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|AES92424.1| Ycf68
           [Medicago truncatula]
          Length = 501

 Score =  116 bits (290), Expect(2) = 2e-34
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = +1

Query: 115 VRRQIPGLNPGQAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 285
           VRRQIPGLNPGQ V+TTKLEYGRGRGNFRWSGEMRRDRKEHQ RKHSAGPTLTLRDE
Sbjct: 161 VRRQIPGLNPGQVVKTTKLEYGRGRGNFRWSGEMRRDRKEHQWRKHSAGPTLTLRDE 217



 Score = 54.7 bits (130), Expect(2) = 2e-34
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = +3

Query: 393 VSRLGSTFARMKLKGIDGGPHKRWSM 470
           +SRLGSTFARMKLKGIDGGPHKRW +
Sbjct: 218 ISRLGSTFARMKLKGIDGGPHKRWRL 243


>ref|YP_001312258.1| hypothetical protein CYtaCp093 [Cycas taitungensis]
           gi|150251548|ref|YP_001312280.1| hypothetical protein
           CYtaCp115 [Cycas taitungensis]
           gi|452848925|ref|YP_007474603.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|452849010|ref|YP_007474689.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|149941576|dbj|BAF65000.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|149941598|dbj|BAF65022.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|372863080|gb|AEX99153.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|372863165|gb|AEX99238.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 75

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = -3

Query: 252 VLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFR 73
           +LSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFR
Sbjct: 1   MLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFR 60

Query: 72  ITLASSVLPRLLAQS 28
           ITLASSVLPRLLAQS
Sbjct: 61  ITLASSVLPRLLAQS 75


>ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago truncatula]
           gi|355521959|gb|AET02413.1| hypothetical protein
           MTR_8g040260 [Medicago truncatula]
          Length = 241

 Score =  128 bits (322), Expect = 4e-28
 Identities = 71/106 (66%), Positives = 74/106 (69%)
 Frame = -2

Query: 343 YPSFTARTTGVSNPIRSPSFRLXXXXXXXXXAFAVGVLSDLYAFHRSTGNSLCPYRTPAW 164
           YPSFTARTT VSNPIRSPSFRL         AFA+GV SDLYAFH STGNSL        
Sbjct: 38  YPSFTARTTRVSNPIRSPSFRLSVLVSAQQSAFAIGVPSDLYAFHHSTGNSL-------- 89

Query: 163 *FPPPVQG*ALGFDGGLKKPPTDALRPIIPDNACILCITAAAGTEL 26
                    +L FDG LKKPPTDALRPII DNACILC+TAAAGTEL
Sbjct: 90  ---------SLRFDGELKKPPTDALRPIISDNACILCLTAAAGTEL 126


Top