BLASTX nr result

ID: Panax21_contig00035300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035300
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150187.1| PREDICTED: fasciclin-like arabinogalactan pr...   109   2e-22
emb|CBI16143.3| unnamed protein product [Vitis vinifera]              104   6e-21
ref|XP_002458743.1| hypothetical protein SORBIDRAFT_03g039440 [S...   103   2e-20
ref|XP_002283909.1| PREDICTED: fasciclin-like arabinogalactan pr...   102   3e-20
emb|CAN72469.1| hypothetical protein VITISV_006797 [Vitis vinifera]   102   3e-20

>ref|XP_004150187.1| PREDICTED: fasciclin-like arabinogalactan protein 4-like [Cucumis
           sativus]
          Length = 424

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/89 (61%), Positives = 69/89 (77%), Gaps = 4/89 (4%)
 Frame = +2

Query: 161 YPDLSDFTNLLSSTTVAADLSRRTSLTLLAVPNSFLRXXXXXXXX----NIADILRYHVL 328
           +PDLSDF  LLSS+ + +DL+ RTSLTLLAVPNS+L             ++AD+LRYHVL
Sbjct: 39  FPDLSDFAALLSSSALLSDLNHRTSLTLLAVPNSYLAASSDLTHRIPPSSLADLLRYHVL 98

Query: 329 LEYLSPTDLRHFTPAGKLIATLFQTTGRA 415
           L+YLSP+DLRH +P+GKL+ TLFQTTGRA
Sbjct: 99  LQYLSPSDLRHISPSGKLVTTLFQTTGRA 127


>emb|CBI16143.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  104 bits (260), Expect = 6e-21
 Identities = 64/138 (46%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
 Frame = +2

Query: 11  LAHSLCKPRKRMATTSLSHFTPIAXXXXXXXXXXXXXXXXXXXXXXXXXXYPDLSDFTNL 190
           L++S    R +MA   +SHF P A                          YPDLSDF NL
Sbjct: 41  LSYSDYTCRGKMAALRISHFAPTAIVYFLLLSSSYPIVALNITSLLST--YPDLSDFANL 98

Query: 191 LSSTTVAADLSRRTSLTLLAVPNSFLR---XXXXXXXXNIADILRYHVLLEYLSPTDLRH 361
           L++T V  DL  R+SLTLLAVPNSFLR           ++AD++RYHVLL+YLS  D+R 
Sbjct: 99  LTATAVDGDLIHRSSLTLLAVPNSFLRSSDLTHRSSASSLADVIRYHVLLQYLSWPDIRQ 158

Query: 362 FTPAGKLIATLFQTTGRA 415
              AGKLI TL+QTTGRA
Sbjct: 159 IPAAGKLITTLYQTTGRA 176


>ref|XP_002458743.1| hypothetical protein SORBIDRAFT_03g039440 [Sorghum bicolor]
           gi|241930718|gb|EES03863.1| hypothetical protein
           SORBIDRAFT_03g039440 [Sorghum bicolor]
          Length = 428

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
 Frame = +2

Query: 161 YPDLSDFTNLLSSTTVAADLSRRTSLTLLAVPNSFL----RXXXXXXXXNIADILRYHVL 328
           +P+ +DF  LL+ST+VA +LS R+SLTLLAVPN+ L             +IAD+LRYHVL
Sbjct: 45  FPNFADFARLLASTSVAGELSGRSSLTLLAVPNANLPQSPSAFVAGAGADIADVLRYHVL 104

Query: 329 LEYLSPTDLRHFTPAGKLIATLFQTTGRA 415
           LEYLSP+DL H +P+GKL+ TLFQTTGRA
Sbjct: 105 LEYLSPSDLAHLSPSGKLVTTLFQTTGRA 133


>ref|XP_002283909.1| PREDICTED: fasciclin-like arabinogalactan protein 4 [Vitis
           vinifera]
          Length = 425

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = +2

Query: 161 YPDLSDFTNLLSSTTVAADLSRRTSLTLLAVPNSFLR---XXXXXXXXNIADILRYHVLL 331
           YPDLSDF NLL++T V  DL  R+SLTLLAVPNSFLR           ++AD++RYHVLL
Sbjct: 38  YPDLSDFANLLTATAVDGDLIHRSSLTLLAVPNSFLRSSDLTHRSSASSLADVIRYHVLL 97

Query: 332 EYLSPTDLRHFTPAGKLIATLFQTTGRA 415
           +YLS  D+R    AGKLI TL+QTTGRA
Sbjct: 98  QYLSWPDIRQIPAAGKLITTLYQTTGRA 125


>emb|CAN72469.1| hypothetical protein VITISV_006797 [Vitis vinifera]
          Length = 470

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = +2

Query: 161 YPDLSDFTNLLSSTTVAADLSRRTSLTLLAVPNSFLR---XXXXXXXXNIADILRYHVLL 331
           YPDLSDF NLL++T V  DL  R+SLTLLAVPNSFLR           ++AD++RYHVLL
Sbjct: 38  YPDLSDFANLLTATAVDGDLIHRSSLTLLAVPNSFLRSSDLTHRSSASSLADVIRYHVLL 97

Query: 332 EYLSPTDLRHFTPAGKLIATLFQTTGRA 415
           +YLS  D+R    AGKLI TL+QTTGRA
Sbjct: 98  QYLSWPDIRQIPAAGKLITTLYQTTGRA 125


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