BLASTX nr result
ID: Panax21_contig00035298
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00035298 (712 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251... 180 3e-43 emb|CAN66178.1| hypothetical protein VITISV_017836 [Vitis vinifera] 178 1e-42 ref|XP_002528391.1| conserved hypothetical protein [Ricinus comm... 177 1e-42 ref|XP_002867327.1| WD-40 repeat protein family [Arabidopsis lyr... 173 3e-41 ref|NP_567858.1| transducin/WD40 domain-containing protein [Arab... 173 4e-41 >ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera] gi|297743697|emb|CBI36580.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 180 bits (456), Expect = 3e-43 Identities = 86/119 (72%), Positives = 94/119 (78%) Frame = +2 Query: 5 GGSSGTVFAWDLRWPQQPIVLSGVGTDEAPTHSLSASDVWEVQYDTFTXXXXXXXXXXXX 184 GGS GTVFAWDLRW QQPI+LSGVGT E THS S+VWEV+YD + Sbjct: 238 GGSLGTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSR 297 Query: 185 VLPAMICSEDGILAVIEQGEEPIELLVEQCAINSFDIDRQNPSDVICSMEWESIVILSR 361 +LPAM+CSEDGILAV+EQGEEPIELL E CAINSFDIDRQNPSDVICS+EWESI ILSR Sbjct: 298 ILPAMLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356 >emb|CAN66178.1| hypothetical protein VITISV_017836 [Vitis vinifera] Length = 405 Score = 178 bits (451), Expect = 1e-42 Identities = 85/119 (71%), Positives = 93/119 (78%) Frame = +2 Query: 5 GGSSGTVFAWDLRWPQQPIVLSGVGTDEAPTHSLSASDVWEVQYDTFTXXXXXXXXXXXX 184 GGS GTVFAWDLRW QQPI+LSGVGT E THS S+VWEV+YD + Sbjct: 286 GGSLGTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSR 345 Query: 185 VLPAMICSEDGILAVIEQGEEPIELLVEQCAINSFDIDRQNPSDVICSMEWESIVILSR 361 +LPAM+CSEDGILAV+EQGEEPIELL E CAINSFDIDRQNP DVICS+EWESI ILSR Sbjct: 346 ILPAMLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPXDVICSLEWESIAILSR 404 >ref|XP_002528391.1| conserved hypothetical protein [Ricinus communis] gi|223532179|gb|EEF33984.1| conserved hypothetical protein [Ricinus communis] Length = 354 Score = 177 bits (450), Expect = 1e-42 Identities = 89/119 (74%), Positives = 95/119 (79%) Frame = +2 Query: 5 GGSSGTVFAWDLRWPQQPIVLSGVGTDEAPTHSLSASDVWEVQYDTFTXXXXXXXXXXXX 184 GGSSGTVFAWDLRW QPIVLSGV ++ THSLS SDVWEVQYD +T Sbjct: 236 GGSSGTVFAWDLRWKDQPIVLSGVELNDTATHSLSESDVWEVQYDCYTKSLSSNSSSSC- 294 Query: 185 VLPAMICSEDGILAVIEQGEEPIELLVEQCAINSFDIDRQNPSDVICSMEWESIVILSR 361 +LPAMICSEDGILAVIEQGEEPIELL E CAINSFDID QNPSDVICS+EWESI I+SR Sbjct: 295 ILPAMICSEDGILAVIEQGEEPIELLAEPCAINSFDIDCQNPSDVICSLEWESIAIISR 353 >ref|XP_002867327.1| WD-40 repeat protein family [Arabidopsis lyrata subsp. lyrata] gi|297313163|gb|EFH43586.1| WD-40 repeat protein family [Arabidopsis lyrata subsp. lyrata] Length = 362 Score = 173 bits (439), Expect = 3e-41 Identities = 85/119 (71%), Positives = 92/119 (77%) Frame = +2 Query: 5 GGSSGTVFAWDLRWPQQPIVLSGVGTDEAPTHSLSASDVWEVQYDTFTXXXXXXXXXXXX 184 GGSSGTVFAWDLRWPQQPIVLSGVG E + LS S+VWEVQYD++T Sbjct: 246 GGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKSNNISSSR--- 302 Query: 185 VLPAMICSEDGILAVIEQGEEPIELLVEQCAINSFDIDRQNPSDVICSMEWESIVILSR 361 +LP M CSEDGIL VIEQGEEPIELL E CAINSFDIDRQNP DVICS+EWESI + SR Sbjct: 303 ILPVMTCSEDGILGVIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFSR 361 >ref|NP_567858.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gi|90093296|gb|ABD85161.1| At4g30840 [Arabidopsis thaliana] gi|332660417|gb|AEE85817.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] Length = 361 Score = 173 bits (438), Expect = 4e-41 Identities = 84/119 (70%), Positives = 92/119 (77%) Frame = +2 Query: 5 GGSSGTVFAWDLRWPQQPIVLSGVGTDEAPTHSLSASDVWEVQYDTFTXXXXXXXXXXXX 184 GGSSGTVFAWDLRWPQQPIVLSGVG E + LS S+VWEVQYD++T Sbjct: 246 GGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKSNVSSSR---- 301 Query: 185 VLPAMICSEDGILAVIEQGEEPIELLVEQCAINSFDIDRQNPSDVICSMEWESIVILSR 361 +LP M CSEDGIL +IEQGEEPIELL E CAINSFDIDRQNP DVICS+EWESI + SR Sbjct: 302 ILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFSR 360