BLASTX nr result

ID: Panax21_contig00035294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035294
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244...   124   4e-34
emb|CBI27815.3| unnamed protein product [Vitis vinifera]              124   4e-34
ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...   119   4e-33
ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-33
dbj|BAD43070.1| hypothetical protein [Arabidopsis thaliana] gi|6...   120   4e-30

>ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244043 [Vitis vinifera]
          Length = 905

 Score =  124 bits (310), Expect(2) = 4e-34
 Identities = 60/86 (69%), Positives = 73/86 (84%)
 Frame = -1

Query: 544  ALDLTNLCKLTDSAIGYLANGCQSIQSFKLRRNAFSDEAMAAYLETCGESLEVLSLNNVN 365
            ALDL NLCKLTDSA GYLA+GCQ++Q+ KLR N+FSDEA+AA+LE  G SL+ LSLNNV+
Sbjct: 755  ALDLGNLCKLTDSAFGYLASGCQAMQTLKLRCNSFSDEAIAAFLEISGGSLKELSLNNVS 814

Query: 364  KVAHNTAISLSRHSRNLQSLDISWCQ 287
            K+ HNTAISL+R SR L  LD+SWC+
Sbjct: 815  KIGHNTAISLARRSRELIRLDLSWCR 840



 Score = 46.2 bits (108), Expect(2) = 4e-34
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -2

Query: 285 NLTNEAVGLIVDSCLSLKMLKLFGCTQV 202
           NLT+  +G IVDSCLSL++LKLFGCTQ+
Sbjct: 841 NLTDGDLGFIVDSCLSLRVLKLFGCTQI 868


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  124 bits (310), Expect(2) = 4e-34
 Identities = 60/86 (69%), Positives = 73/86 (84%)
 Frame = -1

Query: 544 ALDLTNLCKLTDSAIGYLANGCQSIQSFKLRRNAFSDEAMAAYLETCGESLEVLSLNNVN 365
           ALDL NLCKLTDSA GYLA+GCQ++Q+ KLR N+FSDEA+AA+LE  G SL+ LSLNNV+
Sbjct: 682 ALDLGNLCKLTDSAFGYLASGCQAMQTLKLRCNSFSDEAIAAFLEISGGSLKELSLNNVS 741

Query: 364 KVAHNTAISLSRHSRNLQSLDISWCQ 287
           K+ HNTAISL+R SR L  LD+SWC+
Sbjct: 742 KIGHNTAISLARRSRELIRLDLSWCR 767



 Score = 46.2 bits (108), Expect(2) = 4e-34
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -2

Query: 285 NLTNEAVGLIVDSCLSLKMLKLFGCTQV 202
           NLT+  +G IVDSCLSL++LKLFGCTQ+
Sbjct: 768 NLTDGDLGFIVDSCLSLRVLKLFGCTQI 795


>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
           putative [Ricinus communis]
          Length = 765

 Score =  119 bits (297), Expect(2) = 4e-33
 Identities = 58/86 (67%), Positives = 72/86 (83%)
 Frame = -1

Query: 544 ALDLTNLCKLTDSAIGYLANGCQSIQSFKLRRNAFSDEAMAAYLETCGESLEVLSLNNVN 365
           AL+L NL KLTDS +G+LANGC+ IQ+ KL RNAFSDE +AA+LE+ G+ L+ LSLNNV 
Sbjct: 592 ALNLVNLRKLTDSTLGFLANGCREIQTLKLCRNAFSDEGIAAFLESSGDLLKELSLNNVK 651

Query: 364 KVAHNTAISLSRHSRNLQSLDISWCQ 287
           KV H+TAISL+R SRNL SLD+SWC+
Sbjct: 652 KVGHHTAISLARRSRNLISLDLSWCR 677



 Score = 47.8 bits (112), Expect(2) = 4e-33
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 285 NLTNEAVGLIVDSCLSLKMLKLFGCTQV 202
           NL++EAVGLIVDSC SL++LKLFGC QV
Sbjct: 678 NLSDEAVGLIVDSCSSLRVLKLFGCGQV 705


>ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|222855440|gb|EEE92987.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  115 bits (288), Expect(2) = 4e-33
 Identities = 54/87 (62%), Positives = 74/87 (85%)
 Frame = -1

Query: 544 ALDLTNLCKLTDSAIGYLANGCQSIQSFKLRRNAFSDEAMAAYLETCGESLEVLSLNNVN 365
           ALDL+ L  LTDSA+ +LANGCQSI+  KL RN FSDEA++A+LE  G+SL+ LS+NN++
Sbjct: 29  ALDLSYLHNLTDSALKHLANGCQSIRRLKLHRNDFSDEAISAFLEVSGQSLDALSVNNIH 88

Query: 364 KVAHNTAISLSRHSRNLQSLDISWCQQ 284
           +VAHNTA+S+++ SRNL SLD+SWC++
Sbjct: 89  RVAHNTALSIAKCSRNLVSLDLSWCRR 115



 Score = 51.2 bits (121), Expect(2) = 4e-33
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = -2

Query: 282 LTNEAVGLIVDSCLSLKMLKLFGCTQV 202
           LT+EA+G+IVDSCLSLK+LKLFGCTQ+
Sbjct: 116 LTDEALGMIVDSCLSLKLLKLFGCTQI 142


>dbj|BAD43070.1| hypothetical protein [Arabidopsis thaliana]
           gi|62318624|dbj|BAD95072.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 762

 Score =  120 bits (300), Expect(2) = 4e-30
 Identities = 55/86 (63%), Positives = 71/86 (82%)
 Frame = -1

Query: 541 LDLTNLCKLTDSAIGYLANGCQSIQSFKLRRNAFSDEAMAAYLETCGESLEVLSLNNVNK 362
           LDL N+CKLTDS++GYLANGCQ+++     RN FSDEA+AA++ET G SL+ LSLNNV K
Sbjct: 620 LDLANVCKLTDSSLGYLANGCQALEKLIFCRNPFSDEAVAAFVETAGGSLKELSLNNVKK 679

Query: 361 VAHNTAISLSRHSRNLQSLDISWCQQ 284
           V HNTA++L++HS  LQ LDISWC++
Sbjct: 680 VGHNTALALAKHSDKLQILDISWCRE 705



 Score = 36.6 bits (83), Expect(2) = 4e-30
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = -2

Query: 282 LTNEAVGLIVDSCLSLKMLKLFGCTQV 202
           ++N+ +G IVD+  SLK+LK+FGC+QV
Sbjct: 706 MSNDLLGYIVDNSSSLKVLKVFGCSQV 732


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