BLASTX nr result

ID: Panax21_contig00035293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035293
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ...   156   1e-36
ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [S...   111   5e-23
gb|ACL53100.1| unknown [Zea mays]                                     111   7e-23
gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| T...   111   7e-23

>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  173 bits (438), Expect = 1e-41
 Identities = 80/128 (62%), Positives = 104/128 (81%)
 Frame = +3

Query: 3   IEEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNT 182
           I+EA++++ +IK ++ + D+YTYTA+M+G CKVGRS+EA+ELL+ A+EMGL PNVV +NT
Sbjct: 262 IDEAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNT 321

Query: 183 LFNGYFKEGRPLEGIDLLNQMKERNCMPDYISYSTLLHGLLKWGKIRAAFRIYKEMVESG 362
           L +GY KEGRPL+G  +L  MK+R CMPDYISYSTLLHGLL WGK+ A  RI+ EM  SG
Sbjct: 322 LLDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGSG 381

Query: 363 FEVDERMM 386
            E DER+M
Sbjct: 382 LEADERLM 389


>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498638|gb|AES79841.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/128 (57%), Positives = 98/128 (76%)
 Frame = +3

Query: 3   IEEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNT 182
           ++EA ++LM++KT +  +DVY+Y+AVMNGLCKVGRS+EA+EL D A+ +GL P+VV +N 
Sbjct: 232 VDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNA 291

Query: 183 LFNGYFKEGRPLEGIDLLNQMKERNCMPDYISYSTLLHGLLKWGKIRAAFRIYKEMVESG 362
           L  GY +EGR +EG+ +L  MKE  C+ D I+Y T+LHGLLKW +   AF +YKEMV  G
Sbjct: 292 LIEGYSREGREMEGVGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIG 351

Query: 363 FEVDERMM 386
           FEVD RMM
Sbjct: 352 FEVDSRMM 359



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/124 (33%), Positives = 63/124 (50%)
 Frame = +3

Query: 3   IEEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNT 182
           +EEA ++L  +  +  + D  T T ++N LCK G+  +A+E+ +     GL   V  YN 
Sbjct: 162 LEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNC 221

Query: 183 LFNGYFKEGRPLEGIDLLNQMKERNCMPDYISYSTLLHGLLKWGKIRAAFRIYKEMVESG 362
           L  G    GR  E +++L  MK  N   D  SYS +++GL K G+   A  ++ E V  G
Sbjct: 222 LLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVG 281

Query: 363 FEVD 374
              D
Sbjct: 282 LRPD 285


>ref|XP_002467904.1| hypothetical protein SORBIDRAFT_01g036150 [Sorghum bicolor]
           gi|241921758|gb|EER94902.1| hypothetical protein
           SORBIDRAFT_01g036150 [Sorghum bicolor]
          Length = 558

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3   IEEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNT 182
           +EEA  +L  +K S    D+YT+T V++G CKVGR+ EA  +   A+ MGL P +  YN 
Sbjct: 264 LEEALDLLNKLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTIFTYNA 323

Query: 183 LFNGYFKEGRPLEGIDLLNQM--KERNCMPDYISYSTLLHGLLKWGKIRAAFRIYKEMVE 356
           L NG+ KEG PL+   LL +M   +  C PD IS+  +L  LL+ G+  AA++ YK M  
Sbjct: 324 LLNGHCKEGNPLKAFALLMEMCGNDAACPPDKISFGIVLTALLRAGETSAAWQTYKRMER 383

Query: 357 SGFEVDERMM 386
           +GFEVD R +
Sbjct: 384 AGFEVDGRAL 393



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/101 (34%), Positives = 56/101 (55%)
 Frame = +3

Query: 60  VYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNTLFNGYFKEGRPLEGIDLLN 239
           V T++AV+  LCK GR  +A+E+ D    +G  P +  YN+L  G    GR  E +DLLN
Sbjct: 213 VATFSAVVGCLCKRGRVTKAMEVFDAMRALGCEPTIRSYNSLVGGLCYVGRLEEALDLLN 272

Query: 240 QMKERNCMPDYISYSTLLHGLLKWGKIRAAFRIYKEMVESG 362
           ++K+    PD  +++ +L G  K G+   A  I+ + +  G
Sbjct: 273 KLKDSPMTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMG 313


>gb|ACL53100.1| unknown [Zea mays]
          Length = 437

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
 Frame = +3

Query: 3   IEEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNT 182
           +EEA ++L  +K S    D+YT+T V++G CKVGR+ EA  +   A+ MGL P    YN 
Sbjct: 142 LEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNA 201

Query: 183 LFNGYFKEGRPLEGIDLLNQMKERN---CMPDYISYSTLLHGLLKWGKIRAAFRIYKEMV 353
           L NG+ KEG PL+   LL +M   N   C+PD  S+  +L  LL+ G+  AA++ YK M 
Sbjct: 202 LLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQTYKRME 261

Query: 354 ESGFEVDERMM 386
            +GFEVD R +
Sbjct: 262 RAGFEVDGRAL 272



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/119 (31%), Positives = 62/119 (52%)
 Frame = +3

Query: 6   EEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNTL 185
           +EA   L  +     +  V T++AV+  LCK GR  +A+E+LD    +G  P +  YN+L
Sbjct: 73  DEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGLGCEPTIRTYNSL 132

Query: 186 FNGYFKEGRPLEGIDLLNQMKERNCMPDYISYSTLLHGLLKWGKIRAAFRIYKEMVESG 362
             G    GR  E ++LL ++K+    PD  +++ +L G  K G+   A  I+ + +  G
Sbjct: 133 VGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMG 191


>gb|ACL53015.1| unknown [Zea mays] gi|414866677|tpg|DAA45234.1| TPA: hypothetical
           protein ZEAMMB73_414823 [Zea mays]
          Length = 559

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
 Frame = +3

Query: 3   IEEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNT 182
           +EEA ++L  +K S    D+YT+T V++G CKVGR+ EA  +   A+ MGL P    YN 
Sbjct: 264 LEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNA 323

Query: 183 LFNGYFKEGRPLEGIDLLNQMKERN---CMPDYISYSTLLHGLLKWGKIRAAFRIYKEMV 353
           L NG+ KEG PL+   LL +M   N   C+PD  S+  +L  LL+ G+  AA++ YK M 
Sbjct: 324 LLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQTYKRME 383

Query: 354 ESGFEVDERMM 386
            +GFEVD R +
Sbjct: 384 RAGFEVDGRAL 394



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/119 (31%), Positives = 62/119 (52%)
 Frame = +3

Query: 6   EEAYKMLMNIKTSSKKLDVYTYTAVMNGLCKVGRSNEALELLDGALEMGLVPNVVIYNTL 185
           +EA   L  +     +  V T++AV+  LCK GR  +A+E+LD    +G  P +  YN+L
Sbjct: 195 DEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMCGLGCEPTIRTYNSL 254

Query: 186 FNGYFKEGRPLEGIDLLNQMKERNCMPDYISYSTLLHGLLKWGKIRAAFRIYKEMVESG 362
             G    GR  E ++LL ++K+    PD  +++ +L G  K G+   A  I+ + +  G
Sbjct: 255 VGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMG 313


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