BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035263
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525227.1| pentatricopeptide repeat-containing protein,...   144   6e-33
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258...   137   1e-30
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]   136   2e-30

>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 420

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 7/129 (5%)
 Frame = +3

Query: 156 AYNFTVPDSAEEEIFDA----SCVIQEKDLLRKS---KNGGLHVLDLIDRGSIESDGTLY 314
           A  FT  + ++ E  DA    S +I+EKDLLR S      GLHVLDLIDR S+E D TLY
Sbjct: 25  ASQFTTSNGSQLEESDALSSSSLIIEEKDLLRHSLDQSGTGLHVLDLIDRASLEPDRTLY 84

Query: 315 NKLLNKCTQLGKLKEGRIVHAHFANSKLKHYQVVQNTLLNMYAKCGSLDEARHVFDEMPV 494
           + L  KCT   KLKEG++VHAH  NS+ KH  V+QNT+LNMYAKCG+L EAR VFD+MPV
Sbjct: 85  HILFKKCTLFNKLKEGQLVHAHLLNSRFKHDLVIQNTILNMYAKCGNLGEARKVFDQMPV 144

Query: 495 RDMVSWTSL 521
           +D+V+WT+L
Sbjct: 145 KDVVTWTAL 153



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/80 (43%), Positives = 50/80 (62%)
 Frame = +3

Query: 282 RGSIESDGTLYNKLLNKCTQLGKLKEGRIVHAHFANSKLKHYQVVQNTLLNMYAKCGSLD 461
           R +I+     Y+ +L+ C  +G L++G+ VHA    S  K    V NTLL MYAK GS++
Sbjct: 276 RENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKSGSIE 335

Query: 462 EARHVFDEMPVRDMVSWTSL 521
           +AR VFD +  RD+VSW S+
Sbjct: 336 DARKVFDGLVKRDVVSWNSM 355


>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 2/106 (1%)
 Frame = +3

Query: 210 CVIQEKDLLRKSKNG--GLHVLDLIDRGSIESDGTLYNKLLNKCTQLGKLKEGRIVHAHF 383
           CVI +++LLR S N   GLHVLDLID GS+E D TLYN LL +CTQLGKLKEG++VH H 
Sbjct: 41  CVIDDRNLLRPSLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHV 100

Query: 384 ANSKLKHYQVVQNTLLNMYAKCGSLDEARHVFDEMPVRDMVSWTSL 521
            NS  KH  V+QN+LL MYA+CGSL+ AR +FDEMP RDMVSWTS+
Sbjct: 101 LNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSM 146



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/70 (44%), Positives = 46/70 (65%)
 Frame = +3

Query: 312 YNKLLNKCTQLGKLKEGRIVHAHFANSKLKHYQVVQNTLLNMYAKCGSLDEARHVFDEMP 491
           Y+ LL+ C+ +G L++G+ +HAH   S  K    V NTLL+MYAK GS+ +A  VFD++ 
Sbjct: 279 YSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLV 338

Query: 492 VRDMVSWTSL 521
             D+VS  S+
Sbjct: 339 KVDVVSCNSM 348


>ref|XP_003635652.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 262

 Score =  137 bits (344), Expect = 1e-30
 Identities = 71/130 (54%), Positives = 98/130 (75%), Gaps = 6/130 (4%)
 Frame = +3

Query: 150 SPAYNFTVPDSAEEEIFDAS--CVIQEKDLLRKSKNGG---LHVLDLIDRGSIESDGTLY 314
           +PA  F+  + +E E  DA+  CV Q+KDLLRKS++ G   L+ LDLI RGS+  D  LY
Sbjct: 31  APAAPFSDSNDSEVEDGDATSFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLY 90

Query: 315 NKLLNKCTQLGKLKEGRIVHAHFANSK-LKHYQVVQNTLLNMYAKCGSLDEARHVFDEMP 491
           +KLL +CT+LGK+++GRIVHAH  +S  L ++ V+QN ++NMYAKCG LD+AR +FDEMP
Sbjct: 91  SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150

Query: 492 VRDMVSWTSL 521
            +DMV+WT+L
Sbjct: 151 TKDMVTWTAL 160


>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  137 bits (344), Expect = 1e-30
 Identities = 71/130 (54%), Positives = 98/130 (75%), Gaps = 6/130 (4%)
 Frame = +3

Query: 150 SPAYNFTVPDSAEEEIFDAS--CVIQEKDLLRKSKNGG---LHVLDLIDRGSIESDGTLY 314
           +PA  F+  + +E E  DA+  CV Q+KDLLRKS++ G   L+ LDLI RGS+  D  LY
Sbjct: 31  APAAPFSDSNDSEVEDGDAASFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLY 90

Query: 315 NKLLNKCTQLGKLKEGRIVHAHFANSK-LKHYQVVQNTLLNMYAKCGSLDEARHVFDEMP 491
           +KLL +CT+LGK+++GRIVHAH  +S  L ++ V+QN ++NMYAKCG LD+AR +FDEMP
Sbjct: 91  SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150

Query: 492 VRDMVSWTSL 521
            +DMV+WT+L
Sbjct: 151 TKDMVTWTAL 160



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/88 (40%), Positives = 56/88 (63%)
 Frame = +3

Query: 258 LHVLDLIDRGSIESDGTLYNKLLNKCTQLGKLKEGRIVHAHFANSKLKHYQVVQNTLLNM 437
           LH+L  + R + +     Y+ +L+ C  +G L++G+ VHAH   S LK    + NTLL+M
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334

Query: 438 YAKCGSLDEARHVFDEMPVRDMVSWTSL 521
           YAK GS+D+A+ VFD +   D+VSW ++
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTM 362


>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/130 (54%), Positives = 97/130 (74%), Gaps = 6/130 (4%)
 Frame = +3

Query: 150 SPAYNFTVPDSAEEEIFDAS--CVIQEKDLLRKSKNGG---LHVLDLIDRGSIESDGTLY 314
           +PA  F+  + +E E  DA   CV Q+KDLLRKS++ G   L+ LDLI RGS+  D  LY
Sbjct: 31  APAXPFSDSNDSEVEDGDAXSFCVFQDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLY 90

Query: 315 NKLLNKCTQLGKLKEGRIVHAHFANSK-LKHYQVVQNTLLNMYAKCGSLDEARHVFDEMP 491
           +KLL +CT+LGK+++GRIVHAH  +S  L ++ V+QN ++NMYAKCG LD+AR +FDEMP
Sbjct: 91  SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150

Query: 492 VRDMVSWTSL 521
            +DMV+WT+L
Sbjct: 151 TKDMVTWTAL 160



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/88 (39%), Positives = 55/88 (62%)
 Frame = +3

Query: 258 LHVLDLIDRGSIESDGTLYNKLLNKCTQLGKLKEGRIVHAHFANSKLKHYQVVQNTLLNM 437
           LH+L  + R + +     Y+ + + C  +G L++G+ VHAH   S LK    + NTLL+M
Sbjct: 275 LHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDM 334

Query: 438 YAKCGSLDEARHVFDEMPVRDMVSWTSL 521
           YAK GS+D+A+ VFD +   D+VSW ++
Sbjct: 335 YAKAGSIDDAKRVFDRLVKPDVVSWNTM 362