BLASTX nr result

ID: Panax21_contig00035249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035249
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   204   7e-51
ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49
ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   191   1e-46
ref|XP_003543415.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   187   1e-45
gb|ACU20925.1| unknown [Glycine max]                                  187   1e-45

>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score =  204 bits (520), Expect = 7e-51
 Identities = 107/197 (54%), Positives = 139/197 (70%)
 Frame = -3

Query: 605 HAMVLLKMFIEKANSNAQEILKLDFFKTIVRVLSEGLTPQGTRAALYVMLGSCPQGRHRS 426
           HA+ +LKM  E A+S+  E LK +FF+TIV V+ E +T QG  AAL V+  +CP GR+R 
Sbjct: 206 HAVSVLKMVSEDASSSVLERLKPEFFETIVGVIREKITQQGINAALKVLSHACPWGRNRI 265

Query: 425 MMVEAGAVFALIEMELGLPEKKSSEXXXXXXXXXXXCADGRARLVGHAAGITVVTKRIMK 246
           MMV+AGAVF LIE+E   PEKK++E           CADGRA+ + H  GI VV KRI+K
Sbjct: 266 MMVDAGAVFELIELEWRYPEKKTTELILGILFHLCSCADGRAKFLSHRGGIAVVAKRILK 325

Query: 245 VSPAADDSAISIIYLISKFSGTDWVVQEMLRAGTVTRLCLVLQTNCDSYLKEKAREILRR 66
           VSPAADD A+ I+ LI KFSGT  V+QEML    V++LC++LQ +C  YLK+KAREILR 
Sbjct: 326 VSPAADDRAVLILSLICKFSGTSMVLQEMLNVKAVSKLCMMLQADCAVYLKDKAREILRL 385

Query: 65  HTDVWKDSSCVDVTLLS 15
           H+D WK+S C+D + L+
Sbjct: 386 HSDEWKNSPCIDASFLT 402


>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  200 bits (509), Expect = 1e-49
 Identities = 104/197 (52%), Positives = 138/197 (70%)
 Frame = -3

Query: 605 HAMVLLKMFIEKANSNAQEILKLDFFKTIVRVLSEGLTPQGTRAALYVMLGSCPQGRHRS 426
           HA  +LKM +E+A+S+  E LK +FF+ IV VL E +T QG  AAL V+L +CP GR+R 
Sbjct: 206 HAASVLKMLLEEASSSVLERLKPEFFERIVGVLRERITHQGINAALQVLLNACPWGRNRK 265

Query: 425 MMVEAGAVFALIEMELGLPEKKSSEXXXXXXXXXXXCADGRARLVGHAAGITVVTKRIMK 246
           MMVE+GAVF LIE+ELG PE++++E           CA+GRA+ + H   I VV KRI++
Sbjct: 266 MMVESGAVFELIELELGSPERRTTELNLGVLFHLCCCAEGRAQFLSHGGSIAVVAKRILR 325

Query: 245 VSPAADDSAISIIYLISKFSGTDWVVQEMLRAGTVTRLCLVLQTNCDSYLKEKAREILRR 66
           VSPA DD AI I+  I KFSGT  V+QEM     VT+LC++LQ +C +YLK+KAREILR 
Sbjct: 326 VSPAVDDRAILILSQICKFSGTSMVIQEMADVKAVTKLCMLLQADCATYLKDKAREILRS 385

Query: 65  HTDVWKDSSCVDVTLLS 15
           H+D WK+S C+  +L S
Sbjct: 386 HSDKWKNSPCIFSSLSS 402


>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  191 bits (484), Expect = 1e-46
 Identities = 98/198 (49%), Positives = 136/198 (68%)
 Frame = -3

Query: 605 HAMVLLKMFIEKANSNAQEILKLDFFKTIVRVLSEGLTPQGTRAALYVMLGSCPQGRHRS 426
           +A+++LK  +E A+ N  E LK +F   ++R + E ++    +AALYV++  CP GR++ 
Sbjct: 211 NAVLVLKNIVEVASPNLLERLKFEFLNRLIRTMREKISQAAMKAALYVLMEVCPWGRNKW 270

Query: 425 MMVEAGAVFALIEMELGLPEKKSSEXXXXXXXXXXXCADGRARLVGHAAGITVVTKRIMK 246
            M+EAGAVF LIEMEL  PEKK +E           CADGRA+ + HA  + +++KRI++
Sbjct: 271 QMIEAGAVFQLIEMELENPEKKITEIIFCLLGHLCSCADGRAQFLAHAGSMAMLSKRILR 330

Query: 245 VSPAADDSAISIIYLISKFSGTDWVVQEMLRAGTVTRLCLVLQTNCDSYLKEKAREILRR 66
           VS   DD A+ II LISKFSGT+ V+ EMLR G V++LC+VLQ +C  YLKEKAREILR 
Sbjct: 331 VSNTTDDRALHIIALISKFSGTNEVLMEMLRVGAVSKLCMVLQADCAKYLKEKAREILRL 390

Query: 65  HTDVWKDSSCVDVTLLSR 12
           H+ VW +S C+ V LL+R
Sbjct: 391 HSKVWNNSPCIAVYLLTR 408


>ref|XP_003543415.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 422

 Score =  187 bits (475), Expect = 1e-45
 Identities = 100/198 (50%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
 Frame = -3

Query: 602 AMVLLKMFIEKANSNAQEILKLDFFKTIVRVL-SEGLTPQGTRAALYVMLGSCPQGRHRS 426
           AM +LK+ IE  +S     LKL+FFK +V V+ +  LT Q  ++AL+V++ +CP GR+R 
Sbjct: 222 AMPILKLTIEAKDSTPLGNLKLEFFKVVVSVMKNRELTQQAVKSALHVLIETCPLGRNRM 281

Query: 425 MMVEAGAVFALIEMELGLPEKKSSEXXXXXXXXXXXCADGRARLVGHAAGITVVTKRIMK 246
            +VEAGAV  LIE+ L  PEK  +E           CADGR + + HAAGI VV+KRI++
Sbjct: 282 KIVEAGAVVELIELALEKPEKNMTELIFILLAHLCSCADGREQFLQHAAGIAVVSKRILR 341

Query: 245 VSPAADDSAISIIYLISKFSGTDWVVQEMLRAGTVTRLCLVLQTNCDSYLKEKAREILRR 66
           VSP  DD A+ I  L+SKFS ++ VVQEMLR G V++LC+VLQ +C SYLKEKAR +LR 
Sbjct: 342 VSPTTDDRALHIFSLVSKFSASNEVVQEMLRVGAVSKLCMVLQADCASYLKEKARGVLRL 401

Query: 65  HTDVWKDSSCVDVTLLSR 12
           H+  W +S C+ V LL+R
Sbjct: 402 HSKTWNNSPCIQVYLLTR 419


>gb|ACU20925.1| unknown [Glycine max]
          Length = 422

 Score =  187 bits (475), Expect = 1e-45
 Identities = 100/198 (50%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
 Frame = -3

Query: 602 AMVLLKMFIEKANSNAQEILKLDFFKTIVRVL-SEGLTPQGTRAALYVMLGSCPQGRHRS 426
           AM +LK+ IE  +S     LKL+FFK +V V+ +  LT Q  ++AL+V++ +CP GR+R 
Sbjct: 222 AMPILKLTIEAKDSTPLGNLKLEFFKVVVSVMKNRELTQQAVKSALHVLIETCPLGRNRM 281

Query: 425 MMVEAGAVFALIEMELGLPEKKSSEXXXXXXXXXXXCADGRARLVGHAAGITVVTKRIMK 246
            +VEAGAV  LIE+ L  PEK  +E           CADGR + + HAAGI VV+KRI++
Sbjct: 282 KIVEAGAVVELIELALEKPEKNMTELIFILLAHLCSCADGREQFLQHAAGIAVVSKRILR 341

Query: 245 VSPAADDSAISIIYLISKFSGTDWVVQEMLRAGTVTRLCLVLQTNCDSYLKEKAREILRR 66
           VSP  DD A+ I  L+SKFS ++ VVQEMLR G V++LC+VLQ +C SYLKEKAR +LR 
Sbjct: 342 VSPTTDDRALHIFSLVSKFSASNEVVQEMLRVGAVSKLCMVLQADCASYLKEKARGVLRL 401

Query: 65  HTDVWKDSSCVDVTLLSR 12
           H+  W +S C+ V LL+R
Sbjct: 402 HSKTWNNSPCIQVYLLTR 419


Top