BLASTX nr result

ID: Panax21_contig00035246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035246
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147880.1| PREDICTED: mannose/glucose-specific lectin-l...    93   2e-17
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...    93   3e-17
ref|NP_001140746.1| uncharacterized protein LOC100272821 [Zea ma...    92   4e-17
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
emb|CBI19765.3| unnamed protein product [Vitis vinifera]               90   2e-16

>ref|XP_004147880.1| PREDICTED: mannose/glucose-specific lectin-like [Cucumis sativus]
           gi|449511619|ref|XP_004164008.1| PREDICTED:
           mannose/glucose-specific lectin-like [Cucumis sativus]
          Length = 325

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 71/178 (39%), Positives = 97/178 (54%), Gaps = 31/178 (17%)
 Frame = -3

Query: 452 GQSKWSEIHGRGRSTRNTVKLDYPNEYLVSVSGHIG-LHYSM--------TVIRSLTLKS 300
           G+S W   HG  + + + V L+YPNEYL+S+ G+   + + M        TVIRSLTL+S
Sbjct: 52  GESIWKPKHGGNKGSTSEVVLNYPNEYLISIHGYYSDIGHMMEKRVLTPTTVIRSLTLES 111

Query: 299 NRRTYGPFGTPNGT-YTFEISSSNVDKIVGFFGSSGDFLDHIGAYL----SMQAIQWV-- 141
           N +TYGPFG   GT Y+F I  +   KIVGF GSSG FLD IG Y+    S Q++Q    
Sbjct: 112 NIKTYGPFGMDEGTKYSFPIMEA---KIVGFHGSSGWFLDAIGIYVQPISSSQSVQPAQH 168

Query: 140 -------------SVGPYXXXXXXXXXXGVHATVRQLIIYSSE-VIESIRIEY-DKNG 12
                        S+G Y             A ++QL+I++ E  I SI++EY D+NG
Sbjct: 169 KFEMTEVEINEPFSLGEYGGEDGEPWSESFQA-IKQLLIHNDEHRIVSIQMEYVDENG 225



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
 Frame = -3

Query: 452 GQSKWSEIHGRGRSTRNTVKLDYPNEYLVSVSGHIGLHYSMTVIRSLTLKSNRRTYGPFG 273
           G   WS  HG    + + V  ++PNEYLVS+ G+        VIRSLT ++++ +YGPFG
Sbjct: 225 GHFVWSHKHGGDEGSPSQVVFEFPNEYLVSIHGYYKSELGTIVIRSLTFETSKTSYGPFG 284

Query: 272 TPNGTYTFEISSSNVDKIVGFFG-SSGDFLDHIGAYLSM 159
             +GT  F   ++ + KIVG  G S+   L+ IG  +++
Sbjct: 285 NEDGT-NFSFPTAGL-KIVGIHGRSNTSHLNAIGLLVAL 321


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/100 (52%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
 Frame = -3

Query: 452 GQSKWSEIHG-RGRSTRNTVKLDYPNEYLVSVSGHIGL--HYSMTVIRSLTLKSNRRTYG 282
           G S WSE HG  G +  + VKLDYP+EYL SVSGH G    +    +RSLT +SN+RTYG
Sbjct: 676 GTSIWSEKHGGNGGNRTDKVKLDYPDEYLASVSGHYGSLNQWGPVFVRSLTFQSNKRTYG 735

Query: 281 PFGTPNGTY-TFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
           PFG   GTY +F ++     +IVGF G  G F+D IG YL
Sbjct: 736 PFGVEQGTYFSFPMTGG---RIVGFHGKGGYFVDAIGIYL 772



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
 Frame = -3

Query: 452  GQSKWSEIHG-RGRSTRNTVKLDYPNEYLVSVSGHIG---LHYSMTVIRSLTLKSNRRTY 285
            GQS WS  HG  G +  N VKL+YP+E L  +SG+ G        TV++SLT  ++R  Y
Sbjct: 1102 GQSVWSVRHGGSGGTATNRVKLEYPHEVLTRISGYYGPASRDERPTVVKSLTFYTSRGQY 1161

Query: 284  GPFGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
            GPFG   G  TF  S++   K+VGF G  G +LD IG ++
Sbjct: 1162 GPFGEEIG--TFFTSTTTEGKVVGFHGRCGAYLDAIGVHM 1199



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 60/201 (29%), Positives = 81/201 (40%), Gaps = 52/201 (25%)
 Frame = -3

Query: 452  GQSKWSEIHG-RGRSTRNTVKLDYPNEYLVSVSGHIG--LHYSMTVIRSLTLKSNRRTYG 282
            GQ+ W   HG  G      +  DYP E L  +SG  G  +     +I+SLT  +N+  +G
Sbjct: 906  GQAVWGSKHGGTGGFKTEKITFDYPYEILTHISGTYGPLMFMGPNIIKSLTFYTNKGKHG 965

Query: 281  PFGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGA------------YLSMQAIQ--- 147
            PFG   G  +F  +  N  KIVGF G  G FLD IG             YL+   IQ   
Sbjct: 966  PFGDEQGP-SFS-TKPNGGKIVGFHGKEGLFLDAIGVNLMEGKVKPARHYLTDAIIQAEA 1023

Query: 146  ---------W-------------------------VSVGPYXXXXXXXXXXGVHATVRQL 69
                     W                            GP+          GV + ++Q+
Sbjct: 1024 DVTEIDNSPWSNKLVLARRGPTDEVACSVVKEPAPCGPGPWGGDGGRPWDDGVFSGIKQI 1083

Query: 68   IIYSSEVIESIRIEYDKNGQS 6
             +  +E I SI+IEYD+NGQS
Sbjct: 1084 FVTRAEAICSIQIEYDRNGQS 1104


>ref|NP_001140746.1| uncharacterized protein LOC100272821 [Zea mays]
           gi|194700896|gb|ACF84532.1| unknown [Zea mays]
           gi|413945960|gb|AFW78609.1| hypothetical protein
           ZEAMMB73_243066 [Zea mays]
          Length = 596

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
 Frame = -3

Query: 452 GQSKWSEIHGR--GRSTRNTVKLDYPNEYLVSVSGHIG-LHYSMTVIRSLTLKSNRRTYG 282
           G+S WSE HG   G S  + VKLD+P+E LVSVSGH G +  +  +IRSLT +SN  TYG
Sbjct: 55  GRSVWSETHGGTDGGSETDKVKLDFPDEVLVSVSGHYGSVCGTPVIIRSLTFQSNSSTYG 114

Query: 281 PFGTPNGT-YTFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
           PFGT +GT ++  +SS    KI+GF G SG +L+ IG YL
Sbjct: 115 PFGTEDGTPFSLPVSSG---KIIGFHGRSGSYLNSIGFYL 151



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
 Frame = -3

Query: 452 GQSKWSEIHGRGRSTRNTVKLDYPNEYLVSVSGHIGL--HYSMTVIRSLTLKSNRRTYGP 279
           G S WS  HG      + VKLD+P+E L  V G+          V+RSLT  +NR  YGP
Sbjct: 481 GHSIWSSRHGNSGHITHRVKLDFPHEVLTCVYGYYNTSKEDGPRVLRSLTFLTNRGKYGP 540

Query: 278 FGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
           FG   G Y    S++   K+VGF G SG  LD IG ++
Sbjct: 541 FGDEFGAYF--SSATTEGKVVGFHGRSGQHLDAIGVHM 576



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 46/195 (23%)
 Frame = -3

Query: 452 GQSKWSEIHGRGRST-RNTVKLDYPNEYLVSVSGHIGLHYSM--TVIRSLTLKSNRRTYG 282
           GQ+ W   HG       + +  D+P+E L  ++G       M  TV+RSLT  +N+RTYG
Sbjct: 291 GQAVWGNKHGFSSGVIPDKIIFDFPSEVLTHITGFYDSAIIMGPTVVRSLTFHTNKRTYG 350

Query: 281 PFGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGAYLSMQAI---QWVS--------- 138
           P+G   GTY F  S +N  +IVGF G  G ++D IG ++    +   ++VS         
Sbjct: 351 PYGDEYGTY-FSTSFTN-GRIVGFHGREGWYIDGIGVHVQEGKVAQQRFVSRPKTPTSPL 408

Query: 137 -------------------------------VGPYXXXXXXXXXXGVHATVRQLIIYSSE 51
                                           GP+          GV+  V+Q+ +    
Sbjct: 409 VHYNMLAQAPSATYTDGEVAYGMVKEPVPMGPGPWGGEGGRAWDDGVYTGVKQIYVMRGA 468

Query: 50  VIESIRIEYDKNGQS 6
            I SI+IEYD++G S
Sbjct: 469 FIGSIQIEYDRSGHS 483


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
 Frame = -3

Query: 452  GQSKWSEIHGRGRSTR-NTVKLDYPNEYLVSVSGHIG--LHYSMTVIRSLTLKSNRRTYG 282
            G S WSE HG    TR N VKLD P+E+L S+ GH G  L      +RSLTL+SN+RTYG
Sbjct: 994  GSSVWSEKHGGSGGTRTNRVKLDSPDEFLTSIHGHYGSLLERGPVFVRSLTLESNKRTYG 1053

Query: 281  PFGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
            PFG   G Y F + ++   KI+GF G SG +LD IG +L
Sbjct: 1054 PFGIEQGIY-FSLPTTG-GKIIGFHGKSGWYLDAIGVHL 1090



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -3

Query: 452  GQSKWSEIHGRGR-STRNTVKLDYPNEYLVSVSGHIG---LHYSMTVIRSLTLKSNRRTY 285
            GQS WS  HG    +T + VKL+YP+E +  + G+ G   ++     I+SLT  ++R  Y
Sbjct: 1429 GQSIWSTKHGGDYGTTTHRVKLEYPHEVVSCICGYYGPISINEPWNAIKSLTFYTSRGKY 1488

Query: 284  GPFGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
            GPFG   GTY    S+    K+VGF G S  +LD IG ++
Sbjct: 1489 GPFGEEIGTYF--TSTRTEGKVVGFHGRSSLYLDAIGVHM 1526



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
 Frame = -3

Query: 452  GQSKWSEIHGRGRSTRNT-VKLDYPNEYLVSVSGHIGLHYSM--TVIRSLTLKSNRRTYG 282
            GQ+ W   +G     RN  + +DYP E L  ++G+      M   +I+SLT  + +  YG
Sbjct: 1225 GQAVWGSKNGGTGGFRNDKIVIDYPYEVLTHITGYYAPTMVMGPNIIKSLTFHTTKTKYG 1284

Query: 281  PFGTPNGTYTFEISSSNVDK--IVGFFGSSGDFLDHIGAYL 165
            PFG   GT      SSN+ +  IVGF G +G F+D IG ++
Sbjct: 1285 PFGEEQGT----PFSSNIKEGVIVGFHGRTGLFIDAIGVHM 1321


>emb|CBI19765.3| unnamed protein product [Vitis vinifera]
          Length = 670

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
 Frame = -3

Query: 452 GQSKWSEIHGRGRSTR-NTVKLDYPNEYLVSVSGHIG--LHYSMTVIRSLTLKSNRRTYG 282
           G S WSE HG    TR N VKLD P+E+L S+ GH G  L      +RSLTL+SN+RTYG
Sbjct: 84  GSSVWSEKHGGSGGTRTNRVKLDSPDEFLTSIHGHYGSLLERGPVFVRSLTLESNKRTYG 143

Query: 281 PFGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
           PFG   G Y F + ++   KI+GF G SG +LD IG +L
Sbjct: 144 PFGIEQGIY-FSLPTTG-GKIIGFHGKSGWYLDAIGVHL 180



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = -3

Query: 452 GQSKWSEIHGRGR-STRNTVKLDYPNEYLVSVSGHIG---LHYSMTVIRSLTLKSNRRTY 285
           GQS WS  HG    +T + VKL+YP+E +  + G+ G   ++     I+SLT  ++R  Y
Sbjct: 554 GQSIWSTKHGGDYGTTTHRVKLEYPHEVVSCICGYYGPISINEPWNAIKSLTFYTSRGKY 613

Query: 284 GPFGTPNGTYTFEISSSNVDKIVGFFGSSGDFLDHIGAYL 165
           GPFG   GTY    S+    K+VGF G S  +LD IG ++
Sbjct: 614 GPFGEEIGTYF--TSTRTEGKVVGFHGRSSLYLDAIGVHM 651



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
 Frame = -3

Query: 452 GQSKWSEIHGRGRSTRNT-VKLDYPNEYLVSVSGHIGLHYSM--TVIRSLTLKSNRRTYG 282
           GQ+ W   +G     RN  + +DYP E L  ++G+      M   +I+SLT  + +  YG
Sbjct: 350 GQAVWGSKNGGTGGFRNDKIVIDYPYEVLTHITGYYAPTMVMGPNIIKSLTFHTTKTKYG 409

Query: 281 PFGTPNGTYTFEISSSNVDK--IVGFFGSSGDFLDHIGAYL 165
           PFG   GT      SSN+ +  IVGF G +G F+D IG ++
Sbjct: 410 PFGEEQGT----PFSSNIKEGVIVGFHGRTGLFIDAIGVHM 446


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