BLASTX nr result

ID: Panax21_contig00035237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035237
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera]    55   1e-06
ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi...    55   1e-06

>emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera]
          Length = 404

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
 Frame = -2

Query: 452 SPHLSCFMGLSHKPSSNFGYLSRIPANPVQIAAVGRYFSYNYQNLIALSS----FK*LGR 285
           SP L  F+G S     N  Y SRIP NP++I+ V  Y + ++    + SS    FK LGR
Sbjct: 12  SPLLFRFLGFSR----NTIYSSRIPTNPIRISTVRSYSTCHFFCYPSHSSVRTVFKDLGR 67

Query: 284 SNIGFRQLGCDWFRVSAVSN 225
           S IGF + G D+FR+SAVS+
Sbjct: 68  SEIGFSKKGSDYFRISAVSD 87



 Score = 22.3 bits (46), Expect(2) = 1e-06
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 142 GDGGERKWPLLSW 104
           G GG   W LLSW
Sbjct: 110 GSGGGGDWSLLSW 122


>ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera]
           gi|297741716|emb|CBI32848.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
 Frame = -2

Query: 452 SPHLSCFMGLSHKPSSNFGYLSRIPANPVQIAAVGRYFSYNYQNLIALSS----FK*LGR 285
           SP L  F+G S     N  Y SRIP NP++I+ V  Y + ++    + SS    FK LGR
Sbjct: 12  SPLLFRFLGFSR----NTIYSSRIPTNPIRISTVRSYSTCHFFCYPSHSSVRTVFKDLGR 67

Query: 284 SNIGFRQLGCDWFRVSAVSN 225
           S IGF + G D+FR+SAVS+
Sbjct: 68  SEIGFSKKGSDYFRISAVSD 87



 Score = 22.3 bits (46), Expect(2) = 1e-06
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 142 GDGGERKWPLLSW 104
           G GG   W LLSW
Sbjct: 110 GSGGGGDWSLLSW 122


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