BLASTX nr result

ID: Panax21_contig00035226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035226
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    60   2e-07
gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indi...    58   7e-07
ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group] g...    58   7e-07
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    55   5e-06

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -1

Query: 427 QSFFQEGKHSEAEDLLYKCPFHIRKHPAIRRFFGSREKHH 308
           +SFFQEG+ SEA+DLLYKCP HIRKHP I + FGS +  +
Sbjct: 587 ESFFQEGRESEAKDLLYKCPHHIRKHPDICKLFGSAKSEY 626


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -1

Query: 427 QSFFQEGKHSEAEDLLYKCPFHIRKHPAIRRFFGS 323
           QSFF+ G+HSEA+DLL+KCP HIRKHP I   FGS
Sbjct: 585 QSFFRAGRHSEAKDLLFKCPHHIRKHPKISELFGS 619


>gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indica Group]
          Length = 573

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 427 QSFFQEGKHSEAEDLLYKCPFHIRKHPAIRRFFGS 323
           +SFF EG++SEA+DLLYKCPFHIRKHP +   F S
Sbjct: 530 KSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFES 564


>ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group]
           gi|15289974|dbj|BAB63669.1| pentatricopeptide (PPR)
           repeat-containing protein -like [Oryza sativa Japonica
           Group] gi|113535061|dbj|BAF07444.1| Os01g0970900 [Oryza
           sativa Japonica Group] gi|125573469|gb|EAZ14984.1|
           hypothetical protein OsJ_04919 [Oryza sativa Japonica
           Group] gi|215678751|dbj|BAG95188.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215693250|dbj|BAG88632.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 573

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 427 QSFFQEGKHSEAEDLLYKCPFHIRKHPAIRRFFGS 323
           +SFF EG++SEA+DLLYKCPFHIRKHP +   F S
Sbjct: 530 KSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFES 564


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = -1

Query: 424 SFFQEGKHSEAEDLLYKCPFHIRKHPAIRRFFGSREKH 311
           SFF EG++SEA+DLL+KCP HIRKH  + + FGS E +
Sbjct: 581 SFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESN 618


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