BLASTX nr result

ID: Panax21_contig00035217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035217
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533...   335   5e-90
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   335   5e-90
ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|2...   335   6e-90
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   333   2e-89
ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   332   4e-89

>ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533276|gb|EEF35029.1|
           lyase, putative [Ricinus communis]
          Length = 639

 Score =  335 bits (859), Expect = 5e-90
 Identities = 148/205 (72%), Positives = 177/205 (86%)
 Frame = +2

Query: 44  AGGAYVGLAPPGEVGSFQRECKGYQFWTNTNDLGQFFINNIRPGNYNLYAWVPGFIGDYR 223
           A GAYVGLAPPG+VGS+Q ECKGYQFWTN +  G F I+++R G YNLYAWVPGFIGDYR
Sbjct: 356 ANGAYVGLAPPGDVGSWQTECKGYQFWTNADADGYFSISSVRSGEYNLYAWVPGFIGDYR 415

Query: 224 YETAISITPGSSINMGEILYKPPRDGPTLWEIGTPDRSAAEFFVPDPNPKYTNKLYINHP 403
            +  I IT G  IN+G++LY+PPRDGPTLWEIG PDR+A EF++PDPNPKY NKLYINHP
Sbjct: 416 NDCVIKITAGCDINVGDLLYEPPRDGPTLWEIGIPDRTAGEFYIPDPNPKYINKLYINHP 475

Query: 404 DRFRQYGLWDRYTDFYPDGDLVYFVGVSDYRKDWFYAQVTRKGGDNVYRGTTWQIKFKLE 583
           DRFRQYGLW+RY D YP+ DLVY VGVSDY+KDWF+AQV RK  D +Y+GTTWQIKF+L+
Sbjct: 476 DRFRQYGLWERYADLYPNEDLVYTVGVSDYKKDWFFAQVNRKKDDGIYQGTTWQIKFELD 535

Query: 584 NVDQTGTYKLRLALASANMSILEVR 658
           ++DQ+GTYKLRLALA+AN++ L+VR
Sbjct: 536 SLDQSGTYKLRLALATANVAELQVR 560


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  335 bits (859), Expect = 5e-90
 Identities = 154/219 (70%), Positives = 182/219 (83%)
 Frame = +2

Query: 2   LIKGAALVLDY*SIAGGAYVGLAPPGEVGSFQRECKGYQFWTNTNDLGQFFINNIRPGNY 181
           L+K   +  DY S A GAYVGLAP G+VGS+QRECK YQFW+  ++ G F IN+IR G+Y
Sbjct: 343 LVKDRFVSDDYIS-ANGAYVGLAPQGDVGSWQRECKDYQFWSKADENGYFSINSIRTGDY 401

Query: 182 NLYAWVPGFIGDYRYETAISITPGSSINMGEILYKPPRDGPTLWEIGTPDRSAAEFFVPD 361
           NLYAWVPGFIGDYR + AI+IT G  INM +++Y+PPRDGPTLWEIG PDRSAAEF++PD
Sbjct: 402 NLYAWVPGFIGDYRCDVAITITSGCDINMHDLVYEPPRDGPTLWEIGIPDRSAAEFYIPD 461

Query: 362 PNPKYTNKLYINHPDRFRQYGLWDRYTDFYPDGDLVYFVGVSDYRKDWFYAQVTRKGGDN 541
           PNP Y NKLY+NHPDRFRQYGLWDRY + YPDGDLVY VGVSDYRKDWF+AQV RK  DN
Sbjct: 462 PNPMYINKLYVNHPDRFRQYGLWDRYAELYPDGDLVYTVGVSDYRKDWFFAQVNRKKDDN 521

Query: 542 VYRGTTWQIKFKLENVDQTGTYKLRLALASANMSILEVR 658
            Y+ TTWQIKFKL+NVD+ G YKLR+A+ASA ++ L+VR
Sbjct: 522 TYQRTTWQIKFKLDNVDKNGIYKLRVAIASATVAELQVR 560


>ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|222842841|gb|EEE80388.1|
            predicted protein [Populus trichocarpa]
          Length = 731

 Score =  335 bits (858), Expect = 6e-90
 Identities = 148/212 (69%), Positives = 179/212 (84%)
 Frame = +2

Query: 23   VLDY*SIAGGAYVGLAPPGEVGSFQRECKGYQFWTNTNDLGQFFINNIRPGNYNLYAWVP 202
            + DY     GA VGLAPPG++GS+QRECKGYQFWT  +  G F IN+IR G+YNLYAW+P
Sbjct: 441  ISDYCIPGNGACVGLAPPGDIGSWQRECKGYQFWTKADPEGYFSINDIRTGDYNLYAWIP 500

Query: 203  GFIGDYRYETAISITPGSSINMGEILYKPPRDGPTLWEIGTPDRSAAEFFVPDPNPKYTN 382
            GFIGDYR +  I+ITPG  +++G+++YKPPRDGPTLWEIG P+RSAAEF+VPDP+PKY N
Sbjct: 501  GFIGDYRNDEVITITPGCDLDLGDVIYKPPRDGPTLWEIGIPNRSAAEFYVPDPDPKYIN 560

Query: 383  KLYINHPDRFRQYGLWDRYTDFYPDGDLVYFVGVSDYRKDWFYAQVTRKGGDNVYRGTTW 562
            +LY+NHPDRFRQYGLW+RY D YPD DLVY VG SDY KDWF+AQVTRK  DN Y+GTTW
Sbjct: 561  ELYVNHPDRFRQYGLWERYADLYPDEDLVYTVGTSDYAKDWFFAQVTRKKDDNSYQGTTW 620

Query: 563  QIKFKLENVDQTGTYKLRLALASANMSILEVR 658
            QIKFKL+NV  +G+YKLRLALA+AN++ L+VR
Sbjct: 621  QIKFKLDNVQNSGSYKLRLALATANVAELQVR 652


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  333 bits (853), Expect = 2e-89
 Identities = 147/210 (70%), Positives = 181/210 (86%)
 Frame = +2

Query: 29  DY*SIAGGAYVGLAPPGEVGSFQRECKGYQFWTNTNDLGQFFINNIRPGNYNLYAWVPGF 208
           DY S A GAYVGLAPPG+VGS+QRECK YQFW   +D G F ++NIR G+YN+YAWVPGF
Sbjct: 352 DYVS-AKGAYVGLAPPGDVGSWQRECKNYQFWARADDDGYFSVSNIRAGDYNVYAWVPGF 410

Query: 209 IGDYRYETAISITPGSSINMGEILYKPPRDGPTLWEIGTPDRSAAEFFVPDPNPKYTNKL 388
           IGDY+Y+  I+IT G  I++G+++Y+PPRDGPTLWEIG PDRSAAEF+VPDPNPKY NKL
Sbjct: 411 IGDYKYDVVINITEGCDIDLGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKL 470

Query: 389 YINHPDRFRQYGLWDRYTDFYPDGDLVYFVGVSDYRKDWFYAQVTRKGGDNVYRGTTWQI 568
           Y+NHPD+FRQYGLW+RY + YPD DL+Y +GVSDY KDWF+AQVTRK  DN Y+GTTWQI
Sbjct: 471 YVNHPDKFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKKDDNTYQGTTWQI 530

Query: 569 KFKLENVDQTGTYKLRLALASANMSILEVR 658
           KFKL++V+++ +YKLR+ALASA +S L+VR
Sbjct: 531 KFKLDSVNKSSSYKLRVALASATLSELQVR 560


>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  332 bits (851), Expect = 4e-89
 Identities = 149/205 (72%), Positives = 171/205 (83%)
 Frame = +2

Query: 44  AGGAYVGLAPPGEVGSFQRECKGYQFWTNTNDLGQFFINNIRPGNYNLYAWVPGFIGDYR 223
           A GAYVGLA PG+VGS+QRECK YQFW   ++ G F INN+R G+YNLYAWVPG IGDYR
Sbjct: 337 ANGAYVGLALPGDVGSWQRECKDYQFWNRADEGGYFSINNVRTGDYNLYAWVPGVIGDYR 396

Query: 224 YETAISITPGSSINMGEILYKPPRDGPTLWEIGTPDRSAAEFFVPDPNPKYTNKLYINHP 403
           Y+ +I+IT G  I MG+++Y+PPRDGPTLWEIG PDRSA EF+VPDPNPKY NKLY+NHP
Sbjct: 397 YDVSITITSGCDIEMGDLVYEPPRDGPTLWEIGIPDRSAEEFYVPDPNPKYINKLYVNHP 456

Query: 404 DRFRQYGLWDRYTDFYPDGDLVYFVGVSDYRKDWFYAQVTRKGGDNVYRGTTWQIKFKLE 583
           DRFRQYGLW+RY + YPDGDLVY VGVSDYRKDWFYAQVTRK  DN Y+  TWQIKF L+
Sbjct: 457 DRFRQYGLWERYAELYPDGDLVYTVGVSDYRKDWFYAQVTRKKDDNTYQRATWQIKFNLD 516

Query: 584 NVDQTGTYKLRLALASANMSILEVR 658
            VD  G YKLR+ALASA +S L+VR
Sbjct: 517 KVDHNGIYKLRVALASATVSELQVR 541


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