BLASTX nr result

ID: Panax21_contig00035194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035194
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi...   384   e-104
ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102
ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   340   3e-91
ref|XP_003610897.1| Pentatricopeptide repeat-containing protein ...   335   1e-89
ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containi...   327   4e-87

>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like
            [Vitis vinifera]
          Length = 741

 Score =  384 bits (986), Expect = e-104
 Identities = 183/253 (72%), Positives = 212/253 (83%)
 Frame = -3

Query: 1010 FDTVVENYGIVPQLDHFACMVDILGRAGRILDAEKLINEMPMEPDPVVWSTLLAACRKHG 831
            F+T+  N+GIVPQLDH+ACMVDILGRAG+I +A++LI++MPMEPD VVWS LL +CRKHG
Sbjct: 489  FETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHG 548

Query: 830  ETKLANLAATKLMELDPKKSLGYVLMSNIYCSAGSFNEAGLIRKEMKWLGVRKEPGLSWT 651
            ETKLA LAA KL ELDP  SLGYVLMSNI+C+ G FNEA LIR+EM+   VRKEPGLSW 
Sbjct: 549  ETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWI 608

Query: 650  EIGNRVHEFASGGLRHPQAEAIRNNLEELVKRLKGVGYVPETSLALHDVEEEHKAEQLYY 471
            E+GN+VHEFASGG +HP+ EAI   LEELV+RLK +GYVP+ SLALHD+E+EHK EQLYY
Sbjct: 609  EVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYY 668

Query: 470  HSEKLALVFALMTTGGFHHSGVVIRIIKNIRICVDCHNFMKFTSGLIQMEIVVRDSTRFH 291
            HSEKLAL FALM  G    SG  I+I+KNIRICVDCHNFMK  S L+ MEIVVRDS RFH
Sbjct: 669  HSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFH 728

Query: 290  HFRKRVCSCNDYW 252
            HF+ +VCSCNDYW
Sbjct: 729  HFKAKVCSCNDYW 741


>ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|222835677|gb|EEE74112.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  375 bits (963), Expect = e-102
 Identities = 182/253 (71%), Positives = 208/253 (82%)
 Frame = -3

Query: 1010 FDTVVENYGIVPQLDHFACMVDILGRAGRILDAEKLINEMPMEPDPVVWSTLLAACRKHG 831
            FD++  N+G+ PQLDH+ACMVDILGRAG +L+A +LI+ MPM+PD VVWS LL++CRK+G
Sbjct: 275  FDSMSMNHGVSPQLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYG 334

Query: 830  ETKLANLAATKLMELDPKKSLGYVLMSNIYCSAGSFNEAGLIRKEMKWLGVRKEPGLSWT 651
            ET+LA LAA KL EL+P  SLGYV +SNIYCS GS+NEAGLIR EM    VRKEPGLSW 
Sbjct: 335  ETQLAKLAADKLKELEPGNSLGYVQISNIYCSGGSYNEAGLIRDEMNGSRVRKEPGLSWI 394

Query: 650  EIGNRVHEFASGGLRHPQAEAIRNNLEELVKRLKGVGYVPETSLALHDVEEEHKAEQLYY 471
            EI NRVHEFASGG RHPQ EAI   L  L+ +LKGVGYVPETSLAL D+EEEHK EQLY+
Sbjct: 395  EIENRVHEFASGGRRHPQREAIYAKLYSLIGQLKGVGYVPETSLALQDIEEEHKQEQLYH 454

Query: 470  HSEKLALVFALMTTGGFHHSGVVIRIIKNIRICVDCHNFMKFTSGLIQMEIVVRDSTRFH 291
            HSEKLALVFALM+ G     G VIRI+KNIRICVDCHNFMK  S L+Q EIVVRDS RFH
Sbjct: 455  HSEKLALVFALMSEGSLCCGGGVIRIVKNIRICVDCHNFMKLASDLLQKEIVVRDSNRFH 514

Query: 290  HFRKRVCSCNDYW 252
            HF+ R+CSCNDYW
Sbjct: 515  HFKNRMCSCNDYW 527


>ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71420-like [Glycine max]
          Length = 782

 Score =  340 bits (872), Expect = 3e-91
 Identities = 161/253 (63%), Positives = 197/253 (77%)
 Frame = -3

Query: 1010 FDTVVENYGIVPQLDHFACMVDILGRAGRILDAEKLINEMPMEPDPVVWSTLLAACRKHG 831
            F+++ +++G+VPQLDH++CMVD+ GRAG+I +AE+LI +MPM+PD V+WS+LL +CRKHG
Sbjct: 530  FNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHG 589

Query: 830  ETKLANLAATKLMELDPKKSLGYVLMSNIYCSAGSFNEAGLIRKEMKWLGVRKEPGLSWT 651
            ET+LA LAA K  EL+P  SLGYV MSNIY S GSF +AGLIR EM    VRKEPGLSW 
Sbjct: 590  ETRLAKLAADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWV 649

Query: 650  EIGNRVHEFASGGLRHPQAEAIRNNLEELVKRLKGVGYVPETSLALHDVEEEHKAEQLYY 471
            EIG +VHEF SGG  HP   AI + LE ++ +LK +GYVPE SLAL+D E EHK +QL++
Sbjct: 650  EIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQLKEMGYVPELSLALYDTEVEHKEDQLFH 709

Query: 470  HSEKLALVFALMTTGGFHHSGVVIRIIKNIRICVDCHNFMKFTSGLIQMEIVVRDSTRFH 291
            HSEK+ALVFA+M  G     G VI+I+KNIRICVDCHNFMK  S L Q EIVVRDS RFH
Sbjct: 710  HSEKMALVFAIMNEGSLPCGGNVIKIMKNIRICVDCHNFMKLASYLFQKEIVVRDSNRFH 769

Query: 290  HFRKRVCSCNDYW 252
             F+   CSCNDYW
Sbjct: 770  RFKYATCSCNDYW 782


>ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512232|gb|AES93855.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  335 bits (859), Expect = 1e-89
 Identities = 158/253 (62%), Positives = 194/253 (76%)
 Frame = -3

Query: 1010 FDTVVENYGIVPQLDHFACMVDILGRAGRILDAEKLINEMPMEPDPVVWSTLLAACRKHG 831
            F+++ E++GI P LDH++CMVD+ GRAG+I +AE+LI +MPM+PD V+WS+LL +CRKHG
Sbjct: 522  FNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHG 581

Query: 830  ETKLANLAATKLMELDPKKSLGYVLMSNIYCSAGSFNEAGLIRKEMKWLGVRKEPGLSWT 651
            E  LA LAA K   LDPK SL Y+ MSNIY S GSF EAGLIRKEM+   VRK PGLSW 
Sbjct: 582  EADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWV 641

Query: 650  EIGNRVHEFASGGLRHPQAEAIRNNLEELVKRLKGVGYVPETSLALHDVEEEHKAEQLYY 471
            E+G +VHEF SGG  HP+ +AI + LE L+ +LK +GY PE   ALHD+E EH  +QL++
Sbjct: 642  EVGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFH 701

Query: 470  HSEKLALVFALMTTGGFHHSGVVIRIIKNIRICVDCHNFMKFTSGLIQMEIVVRDSTRFH 291
            HSEK+ALVFA+M  G    +G VI+I+KNIRICVDCHNFMK  S L Q EIVVRDS RFH
Sbjct: 702  HSEKMALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFH 761

Query: 290  HFRKRVCSCNDYW 252
            HF+   CSCNDYW
Sbjct: 762  HFKYATCSCNDYW 774


>ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like
            [Cucumis sativus] gi|449503335|ref|XP_004161951.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g71420-like [Cucumis sativus]
          Length = 629

 Score =  327 bits (837), Expect = 4e-87
 Identities = 161/249 (64%), Positives = 189/249 (75%)
 Frame = -3

Query: 998  VENYGIVPQLDHFACMVDILGRAGRILDAEKLINEMPMEPDPVVWSTLLAACRKHGETKL 819
            + NYGIV +LDH+ACMVDILGR+G++ +A   I+ MP+EPD VVWS+ L +CRK+G T L
Sbjct: 381  ITNYGIVCRLDHYACMVDILGRSGQVQEAHDFISNMPIEPDFVVWSSFLGSCRKYGATGL 440

Query: 818  ANLAATKLMELDPKKSLGYVLMSNIYCSAGSFNEAGLIRKEMKWLGVRKEPGLSWTEIGN 639
            A LA+ KL ELDP  SL YV MSN+YC  GSF EA LIR EM    V+KEPGLS  EI N
Sbjct: 441  AKLASYKLKELDPSNSLAYVQMSNLYCFNGSFYEADLIRMEMTGSRVKKEPGLSRVEIEN 500

Query: 638  RVHEFASGGLRHPQAEAIRNNLEELVKRLKGVGYVPETSLALHDVEEEHKAEQLYYHSEK 459
            +VHEFASGG  HPQ E I N LE+L+ RLK +GYVPETSLALHDVE+E K +QLY+HSEK
Sbjct: 501  QVHEFASGGRCHPQREVICNELEKLIGRLKEIGYVPETSLALHDVEQEQKEQQLYHHSEK 560

Query: 458  LALVFALMTTGGFHHSGVVIRIIKNIRICVDCHNFMKFTSGLIQMEIVVRDSTRFHHFRK 279
            LALVF++M           IRI+KNIRICVDCHNFMK  S L+Q EIV+RDS RFHHF  
Sbjct: 561  LALVFSVMNDYNLGRVNNPIRIMKNIRICVDCHNFMKLASRLLQKEIVIRDSNRFHHFMA 620

Query: 278  RVCSCNDYW 252
             +CSCNDYW
Sbjct: 621  GLCSCNDYW 629


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