BLASTX nr result

ID: Panax21_contig00035191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035191
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              198   7e-49
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   198   7e-49
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   182   4e-44
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   175   7e-42
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   160   3e-37

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  198 bits (504), Expect = 7e-49
 Identities = 96/193 (49%), Positives = 127/193 (65%)
 Frame = +3

Query: 3    YYDALDAAKSGKKVEIPQELKAEMYPHYMERWNKYNSKSVLGLIYDTVQSSQTETVSAEA 182
            YYDALDA KSG KV + +ELKAE +PH+M R + Y+S S+LG IYD V+S Q E  S + 
Sbjct: 737  YYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKE 796

Query: 183  IWKLPYFEHAQIPDSCLTLWKGRYIEYKKEMFEALLSNDESKHSSALDIVKKYKQMLYGA 362
            IW+LP F    +P +CL  WK RY +Y+ EM  AL    E+K   A +++ KYKQ+LYGA
Sbjct: 797  IWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGA 856

Query: 363  PEFEASDRKMGDIYNEALALYHAVYDCAKSVPDAGKCWFAWKVASSALCKFHAMKETETV 542
             EFE S R + DI++EALA+YH  Y+   +      C F W+VA  ALCK + +K  E  
Sbjct: 857  AEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKS 916

Query: 543  MVCVPSVLQEVMS 581
            MVCVPSVL++V +
Sbjct: 917  MVCVPSVLRQVFN 929


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  198 bits (504), Expect = 7e-49
 Identities = 96/193 (49%), Positives = 127/193 (65%)
 Frame = +3

Query: 3    YYDALDAAKSGKKVEIPQELKAEMYPHYMERWNKYNSKSVLGLIYDTVQSSQTETVSAEA 182
            YYDALDA KSG KV + +ELKAE +PH+M R + Y+S S+LG IYD V+S Q E  S + 
Sbjct: 751  YYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKE 810

Query: 183  IWKLPYFEHAQIPDSCLTLWKGRYIEYKKEMFEALLSNDESKHSSALDIVKKYKQMLYGA 362
            IW+LP F    +P +CL  WK RY +Y+ EM  AL    E+K   A +++ KYKQ+LYGA
Sbjct: 811  IWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGA 870

Query: 363  PEFEASDRKMGDIYNEALALYHAVYDCAKSVPDAGKCWFAWKVASSALCKFHAMKETETV 542
             EFE S R + DI++EALA+YH  Y+   +      C F W+VA  ALCK + +K  E  
Sbjct: 871  AEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKS 930

Query: 543  MVCVPSVLQEVMS 581
            MVCVPSVL++V +
Sbjct: 931  MVCVPSVLRQVFN 943


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  182 bits (463), Expect = 4e-44
 Identities = 93/193 (48%), Positives = 123/193 (63%)
 Frame = +3

Query: 3    YYDALDAAKSGKKVEIPQELKAEMYPHYMERWNKYNSKSVLGLIYDTVQSSQTETVSAEA 182
            YYDALDA KSG KV + +ELKAE +PH+M R + Y+S S+LG IYD V+S Q E  S + 
Sbjct: 1020 YYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKD 1079

Query: 183  IWKLPYFEHAQIPDSCLTLWKGRYIEYKKEMFEALLSNDESKHSSALDIVKKYKQMLYGA 362
                       +P +CL  WK RY +Y+ EM  AL    E+K   A +++ KYKQ+LYGA
Sbjct: 1080 A----------VPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGA 1129

Query: 363  PEFEASDRKMGDIYNEALALYHAVYDCAKSVPDAGKCWFAWKVASSALCKFHAMKETETV 542
             EFE S RK+ DI++EALA+YH  Y+ A +      C F W+VA  ALCK + +K  E  
Sbjct: 1130 AEFEESPRKLEDIFDEALAIYHVTYEFAINGARVSYCNFPWRVAGRALCKLYTVKLGEKS 1189

Query: 543  MVCVPSVLQEVMS 581
            MVCVPSVL++V +
Sbjct: 1190 MVCVPSVLRQVFN 1202


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 953

 Score =  175 bits (444), Expect = 7e-42
 Identities = 88/193 (45%), Positives = 129/193 (66%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3    YYDALDAAKSGKKVEIPQELKAEMYPHYMERWNKYNSKSVLGLIYDTVQSSQTETVSAEA 182
            YY+ALDA KSG+KV++P +L AE++PHYME+   + S S+LGLIYD V+      +  E 
Sbjct: 760  YYEALDAPKSGRKVQVPNDLIAELFPHYMEKDKSFTSTSILGLIYDEVEIWLENDMVGE- 818

Query: 183  IWKLPYFEHAQIPDSCLTLWKGRYIEYKKEMFEALLSNDESK-HSSALDIVKKYKQMLYG 359
            IWKLP F+  ++P SCL  WK +Y EY+K+M +AL   D+SK H  A ++ +KYK+  YG
Sbjct: 819  IWKLPCFD-VEVPPSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYG 877

Query: 360  AP-EFEASDRKMGDIYNEALALYHAVYDCAKSVPDAGKCWFAWKVASSALCKFHAMKETE 536
               E E   + +GDI+NEALA+Y+  Y+ A    +  +C FAWK+A SAL + + +K+ E
Sbjct: 878  PTLEMEGCLKSIGDIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNE 937

Query: 537  TVMVCVPSVLQEV 575
              + C PSV++E+
Sbjct: 938  KALNCDPSVVREI 950


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  160 bits (404), Expect = 3e-37
 Identities = 89/193 (46%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3    YYDALDAAKSG-KKVEIPQELKAEMYPHYMERW-NKYNSKSVLGLIYDTVQSSQTETVSA 176
            YYDALDA K G KK+E+P+ LKA   PH+MER  N Y S S+LG I+DT    Q E  + 
Sbjct: 865  YYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQEEVPNI 924

Query: 177  EAIWKLPYFEHAQIPDSCLTLWKGRYIEYKKEMFEALLSNDESKHSSALDIVKKYKQMLY 356
            E + KLP FE  ++P+     WK  Y  Y+K+M +A+  + ++K+ +A   +KKYK++LY
Sbjct: 925  E-VQKLPCFEE-ELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILY 982

Query: 357  GAPEFEASDRKMGDIYNEALALYHAVYDCAKSVPDAGKCWFAWKVASSALCKFHAMKETE 536
            GA E E S R   ++Y EALA+Y   YD A S      C FAWKVA SAL K +A+K +E
Sbjct: 983  GAEELEGSPRSNEEVYQEALAIYQVTYDHAMS-RSVRNCGFAWKVAGSALFKLYAIKHSE 1041

Query: 537  TVMVCVPSVLQEV 575
                C+PSV++E+
Sbjct: 1042 RSFHCLPSVMREI 1054


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