BLASTX nr result

ID: Panax21_contig00035178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035178
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19962.3| unnamed protein product [Vitis vinifera]              353   2e-95
ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier com...   352   7e-95
ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lyc...   331   2e-88
emb|CAN65343.1| hypothetical protein VITISV_025052 [Vitis vinifera]   329   6e-88
ref|XP_002306678.1| auxin efflux carrier component [Populus tric...   313   3e-83

>emb|CBI19962.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  353 bits (907), Expect = 2e-95
 Identities = 182/235 (77%), Positives = 198/235 (84%), Gaps = 2/235 (0%)
 Frame = +2

Query: 2   GKIFRQSSPVFSGMKMVWESPGK--GQLXXXXXXXXXXXXKDLSFRDCSKIQLQEEDDTK 175
           GK++RQ SP FSG++MVWESPGK  G              +++SFRD SK  + EE+D K
Sbjct: 293 GKVYRQQSPAFSGVRMVWESPGKCNGGGGERQGCKDVVGEREISFRDSSKFPVAEEEDPK 352

Query: 176 GTTMNQEMPHALVMLRLILIMVGRKLSRNPNTYSSVLGLLWSLISFKWNMGMPNLVKYSI 355
            T   Q+MP   VMLRLIL MVGRKLSRNPNTYSSVLGLLWSLISFKWN+GMP+LVKYSI
Sbjct: 353 ATATGQDMPRTHVMLRLILTMVGRKLSRNPNTYSSVLGLLWSLISFKWNVGMPSLVKYSI 412

Query: 356 KIISDAGLGMAMFSLGLFMALQPRIIACGTKMATLGMLIRFVGGPILMSTASIAVGLRGV 535
           KIISDAGLGMAMFSLGLFMALQPRIIACGTK AT+GM IRF+ GPILMS ASIAVGLRGV
Sbjct: 413 KIISDAGLGMAMFSLGLFMALQPRIIACGTKRATMGMGIRFICGPILMSAASIAVGLRGV 472

Query: 536 KLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYALLGL 700
           +LH AIVQA+LPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYY LLGL
Sbjct: 473 RLHAAIVQASLPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYILLGL 527


>ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier component 6-like [Vitis
           vinifera]
          Length = 532

 Score =  352 bits (903), Expect = 7e-95
 Identities = 181/233 (77%), Positives = 196/233 (84%)
 Frame = +2

Query: 2   GKIFRQSSPVFSGMKMVWESPGKGQLXXXXXXXXXXXXKDLSFRDCSKIQLQEEDDTKGT 181
           GK++RQ SP FSG++MVWESPGK                ++SFRD SK  + EE+D K T
Sbjct: 316 GKVYRQQSPAFSGVRMVWESPGK----------------EISFRDSSKFPVAEEEDPKAT 359

Query: 182 TMNQEMPHALVMLRLILIMVGRKLSRNPNTYSSVLGLLWSLISFKWNMGMPNLVKYSIKI 361
              Q+MP   VMLRLIL MVGRKLSRNPNTYSSVLGLLWSLISFKWN+GMP+LVKYSIKI
Sbjct: 360 ATGQDMPRTHVMLRLILTMVGRKLSRNPNTYSSVLGLLWSLISFKWNVGMPSLVKYSIKI 419

Query: 362 ISDAGLGMAMFSLGLFMALQPRIIACGTKMATLGMLIRFVGGPILMSTASIAVGLRGVKL 541
           ISDAGLGMAMFSLGLFMALQPRIIACGTK AT+GM IRF+ GPILMS ASIAVGLRGV+L
Sbjct: 420 ISDAGLGMAMFSLGLFMALQPRIIACGTKRATMGMGIRFICGPILMSAASIAVGLRGVRL 479

Query: 542 HTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYALLGL 700
           H AIVQA+LPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYY LLGL
Sbjct: 480 HAAIVQASLPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYILLGL 532


>ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lycopersicum]
            gi|327187149|gb|ADR30414.2| auxin efflux facilitator
            SlPIN6 [Solanum lycopersicum]
          Length = 538

 Score =  331 bits (848), Expect = 2e-88
 Identities = 174/240 (72%), Positives = 195/240 (81%), Gaps = 7/240 (2%)
 Frame = +2

Query: 2    GKIFRQSSPVFSGMKMVWESP---GKGQLXXXXXXXXXXXXKDLSFRDCSKIQLQE---- 160
            GK+F+Q+SP     KM WES    G+ Q             K++SFRD S   +QE    
Sbjct: 307  GKVFKQASP---SSKMAWESSCLNGERQ-----GYRDDVGEKEISFRDISNFPVQEVGAA 358

Query: 161  EDDTKGTTMNQEMPHALVMLRLILIMVGRKLSRNPNTYSSVLGLLWSLISFKWNMGMPNL 340
            +       + QEMP+ALVMLRLI++MVGRKLSRNPNTYSS+LGLLWSLISFKWN+GMP+L
Sbjct: 359  DSSNTNNIIKQEMPNALVMLRLIIVMVGRKLSRNPNTYSSILGLLWSLISFKWNVGMPSL 418

Query: 341  VKYSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKMATLGMLIRFVGGPILMSTASIAV 520
            VKYSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKMA +GM IRF+GGP++MS  SIAV
Sbjct: 419  VKYSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKMAAIGMAIRFIGGPLVMSATSIAV 478

Query: 521  GLRGVKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYALLGL 700
            GL+GV+LHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYY LLGL
Sbjct: 479  GLKGVRLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYVLLGL 538


>emb|CAN65343.1| hypothetical protein VITISV_025052 [Vitis vinifera]
          Length = 512

 Score =  329 bits (843), Expect = 6e-88
 Identities = 174/233 (74%), Positives = 190/233 (81%)
 Frame = +2

Query: 2   GKIFRQSSPVFSGMKMVWESPGKGQLXXXXXXXXXXXXKDLSFRDCSKIQLQEEDDTKGT 181
           GK++RQ SP FSG++MVWESPGK               KD+       + + EE+D K T
Sbjct: 293 GKVYRQQSPAFSGVRMVWESPGK----CNGGGGERQGCKDV-------VGVAEEEDPKAT 341

Query: 182 TMNQEMPHALVMLRLILIMVGRKLSRNPNTYSSVLGLLWSLISFKWNMGMPNLVKYSIKI 361
              Q+MP   VMLRLIL MVGRKLSRNPNTYSSV+GLLWSLISFKWN+GMP+LVKYSIKI
Sbjct: 342 ATGQDMPRTHVMLRLILTMVGRKLSRNPNTYSSVJGLLWSLISFKWNVGMPSLVKYSIKI 401

Query: 362 ISDAGLGMAMFSLGLFMALQPRIIACGTKMATLGMLIRFVGGPILMSTASIAVGLRGVKL 541
           ISDAGLGMAMFSLGLFMALQP+IIACGTK AT+GM IRF+ GPILMS ASIAVGLRGV+L
Sbjct: 402 ISDAGLGMAMFSLGLFMALQPQIIACGTKRATMGMGIRFICGPILMSAASIAVGLRGVRL 461

Query: 542 HTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYALLGL 700
           H AI  AALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYY LLGL
Sbjct: 462 HAAI--AALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYILLGL 512


>ref|XP_002306678.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222856127|gb|EEE93674.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 534

 Score =  313 bits (802), Expect = 3e-83
 Identities = 163/233 (69%), Positives = 186/233 (79%)
 Frame = +2

Query: 2   GKIFRQSSPVFSGMKMVWESPGKGQLXXXXXXXXXXXXKDLSFRDCSKIQLQEEDDTKGT 181
           GKI+RQ SP      M++ES                  K++SFRD  K+   EE ++K +
Sbjct: 323 GKIYRQPSPA---TLMMFES------------------KEISFRDSCKMPAPEESNSKES 361

Query: 182 TMNQEMPHALVMLRLILIMVGRKLSRNPNTYSSVLGLLWSLISFKWNMGMPNLVKYSIKI 361
             NQEMPHA+VM+RLIL++VGRKLSRNPNTYSSVLGLLWSL SFKWN+GMP+LVKYSIKI
Sbjct: 362 VSNQEMPHAIVMIRLILVVVGRKLSRNPNTYSSVLGLLWSLASFKWNVGMPSLVKYSIKI 421

Query: 362 ISDAGLGMAMFSLGLFMALQPRIIACGTKMATLGMLIRFVGGPILMSTASIAVGLRGVKL 541
           ISDAGLGMAMFSLGLFMALQPRII CG K AT+ M IRF+ GPI+MST S+AVG+RGV+L
Sbjct: 422 ISDAGLGMAMFSLGLFMALQPRIIVCGKKRATMAMAIRFICGPIVMSTTSVAVGMRGVRL 481

Query: 542 HTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYALLGL 700
             AIVQAAL QGIVPFVFAREYGLHPDI+STGVIFGMLVSLPVTL+YY  LGL
Sbjct: 482 RAAIVQAALSQGIVPFVFAREYGLHPDIMSTGVIFGMLVSLPVTLIYYIFLGL 534


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