BLASTX nr result

ID: Panax21_contig00035148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035148
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30347.3| unnamed protein product [Vitis vinifera]              318   2e-84
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...   318   2e-84
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]   318   2e-84
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...   282   1e-73
ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...   266   7e-69

>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  318 bits (814), Expect = 2e-84
 Identities = 155/189 (82%), Positives = 166/189 (87%)
 Frame = -3

Query: 988 TMLFEEMPKRDLISYCSMIQGLSIHGCGSQAVSLFSRMLNEGLTPDDVAFKVILTACSHA 809
           T LFEEMPKRDLISYCSM+QGLSIHGCG QAVSLFSRMLNEGLTPDDVAF VILTACS A
Sbjct: 372 TKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRA 431

Query: 808 GLVEEGCNYFYSMMNKYSIIPSPDHYACMVDLLCRSGKLIAAYELLKKTPVEPHAGAWGA 629
           GLV+EGC YF SM   YSI+PSPDHYACMVDLL R+G+L  AYELLK  PVEPHAGAWGA
Sbjct: 432 GLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGA 491

Query: 628 LLGACKLHCEIELGKEVASRLFELEPLNAGNYVSLSNIYAAADQWLDVYFIRNKMNERGI 449
           LLGACKLHC+IELG+ VA +LFELEP NAGNYV LSNIYAAA+QWLDV  +RNKM ERGI
Sbjct: 492 LLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGI 551

Query: 448 QKISGCSCI 422
           +KI GCS I
Sbjct: 552 RKIPGCSWI 560


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  318 bits (814), Expect = 2e-84
 Identities = 155/189 (82%), Positives = 166/189 (87%)
 Frame = -3

Query: 988 TMLFEEMPKRDLISYCSMIQGLSIHGCGSQAVSLFSRMLNEGLTPDDVAFKVILTACSHA 809
           T LFEEMPKRDLISYCSM+QGLSIHGCG QAVSLFSRMLNEGLTPDDVAF VILTACS A
Sbjct: 373 TKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRA 432

Query: 808 GLVEEGCNYFYSMMNKYSIIPSPDHYACMVDLLCRSGKLIAAYELLKKTPVEPHAGAWGA 629
           GLV+EGC YF SM   YSI+PSPDHYACMVDLL R+G+L  AYELLK  PVEPHAGAWGA
Sbjct: 433 GLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGA 492

Query: 628 LLGACKLHCEIELGKEVASRLFELEPLNAGNYVSLSNIYAAADQWLDVYFIRNKMNERGI 449
           LLGACKLHC+IELG+ VA +LFELEP NAGNYV LSNIYAAA+QWLDV  +RNKM ERGI
Sbjct: 493 LLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGI 552

Query: 448 QKISGCSCI 422
           +KI GCS I
Sbjct: 553 RKIPGCSWI 561


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score =  318 bits (814), Expect = 2e-84
 Identities = 155/189 (82%), Positives = 166/189 (87%)
 Frame = -3

Query: 988 TMLFEEMPKRDLISYCSMIQGLSIHGCGSQAVSLFSRMLNEGLTPDDVAFKVILTACSHA 809
           T LFEEMPKRDLISYCSM+QGLSIHGCG QAVSLFSRMLNEGLTPDDVAF VILTACS A
Sbjct: 358 TKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRA 417

Query: 808 GLVEEGCNYFYSMMNKYSIIPSPDHYACMVDLLCRSGKLIAAYELLKKTPVEPHAGAWGA 629
           GLV+EGC YF SM   YSI+PSPDHYACMVDLL R+G+L  AYELLK  PVEPHAGAWGA
Sbjct: 418 GLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGA 477

Query: 628 LLGACKLHCEIELGKEVASRLFELEPLNAGNYVSLSNIYAAADQWLDVYFIRNKMNERGI 449
           LLGACKLHC+IELG+ VA +LFELEP NAGNYV LSNIYAAA+QWLDV  +RNKM ERGI
Sbjct: 478 LLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGI 537

Query: 448 QKISGCSCI 422
           +KI GCS I
Sbjct: 538 RKIPGCSWI 546


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score =  282 bits (721), Expect = 1e-73
 Identities = 138/187 (73%), Positives = 158/187 (84%)
 Frame = -3

Query: 982 LFEEMPKRDLISYCSMIQGLSIHGCGSQAVSLFSRMLNEGLTPDDVAFKVILTACSHAGL 803
           LFE+MPKRDLISYCS++QGLSIHG G QAVSLF RML E LTPDDVAF VILTACS AGL
Sbjct: 379 LFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGL 438

Query: 802 VEEGCNYFYSMMNKYSIIPSPDHYACMVDLLCRSGKLIAAYELLKKTPVEPHAGAWGALL 623
           V+EG +YF  M  KYS++PS DHYAC+VDLL RSG+L  AYEL+K  PV+ HAGAWGALL
Sbjct: 439 VDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALL 498

Query: 622 GACKLHCEIELGKEVASRLFELEPLNAGNYVSLSNIYAAADQWLDVYFIRNKMNERGIQK 443
           GACKL+C+ EL + VASRL E+EP NAGNYV LSNIYAAAD+WLDV  +RN+MNERG++K
Sbjct: 499 GACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRK 558

Query: 442 ISGCSCI 422
           I GCS I
Sbjct: 559 IPGCSWI 565


>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score =  266 bits (679), Expect = 7e-69
 Identities = 131/187 (70%), Positives = 154/187 (82%)
 Frame = -3

Query: 982 LFEEMPKRDLISYCSMIQGLSIHGCGSQAVSLFSRMLNEGLTPDDVAFKVILTACSHAGL 803
           LF+E P+RD++ YCSMIQGLSIHG G +AV+LF+RML EGLTPD+VAF VILTACS AGL
Sbjct: 380 LFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGL 439

Query: 802 VEEGCNYFYSMMNKYSIIPSPDHYACMVDLLCRSGKLIAAYELLKKTPVEPHAGAWGALL 623
           V+EG NYF SM  KY I P PDHYACMVDLL RSG +  AYEL+K  P EPHAGAWGALL
Sbjct: 440 VDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAWGALL 499

Query: 622 GACKLHCEIELGKEVASRLFELEPLNAGNYVSLSNIYAAADQWLDVYFIRNKMNERGIQK 443
           GACKL+ + ELG+ VA+RLFELEPLNA NYV LS+IYAAA++W+DV  +R+KM ER ++K
Sbjct: 500 GACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRK 559

Query: 442 ISGCSCI 422
           I G S I
Sbjct: 560 IPGSSKI 566


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