BLASTX nr result

ID: Panax21_contig00035141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035141
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525000.1| conserved hypothetical protein [Ricinus comm...   285   1e-74
ref|XP_002311946.1| predicted protein [Populus trichocarpa] gi|2...   273   5e-71
ref|XP_002316500.1| predicted protein [Populus trichocarpa] gi|2...   265   2e-68
emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]   254   2e-65
ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252...   252   1e-64

>ref|XP_002525000.1| conserved hypothetical protein [Ricinus communis]
            gi|223535744|gb|EEF37407.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1304

 Score =  285 bits (730), Expect = 1e-74
 Identities = 152/274 (55%), Positives = 198/274 (72%), Gaps = 2/274 (0%)
 Frame = +2

Query: 338  MAGNSRYELNSTSSELGFVGIYPNGQRGNHFGHTLDRSGSFREGTENRIVGSGIGTSRAS 517
            MAGN RYE +++  ELGF G YPNGQRGN+   +++RSGSFREG+E+R  GSG  T RAS
Sbjct: 1    MAGNMRYE-SASPEELGFTGSYPNGQRGNYSTVSMERSGSFREGSESRAFGSGASTPRAS 59

Query: 518  GTLLVELPPLPQCLMLDPILMGDQKYTRFGELRRVIGLSIGSTSEDNSFGATHLKSSPAL 697
             +   +   L   L+LDPI M D KYTR GE RRV+G+S G+ +EDNSFGA H K  P +
Sbjct: 60   ASS--DAASLTHYLLLDPITMVDPKYTRSGEFRRVLGISYGNATEDNSFGAAHSKLPPPV 117

Query: 698  ASEDVKSFKSSVVDTCIKARGRSRKLDEHIYKLNKYCEAITNKKQQRNEVITPERSACLN 877
            A+E++  FK SV D  +KAR R +KL+E + KLNK+CEA+  KKQ R+E++  ERS   N
Sbjct: 118  ATEELNRFKKSVSDATLKARVRIKKLNESLLKLNKFCEAMNLKKQHRSEMLMSERSGVSN 177

Query: 878  L-KMGIQINQNSPDLVTQKLEDRPKTVLLNKRVRTSVAEARPECLSNGLPRQPLFLAKDR 1054
            L KMGIQI++N+ D  TQ+LEDR K +++NKRVR+SVAE R +  SN LPRQP+ + KDR
Sbjct: 178  LTKMGIQIHRNASDPGTQRLEDRTKNIVMNKRVRSSVAELRADGRSNTLPRQPVVMGKDR 237

Query: 1055 DILKETSADSD-AVEKIRRLPASGEGWDKKMKRK 1153
            D+ ++ S  SD   EK RR+PA GEGW++KMKRK
Sbjct: 238  DMHRDGSEGSDLPEEKFRRVPAGGEGWERKMKRK 271


>ref|XP_002311946.1| predicted protein [Populus trichocarpa] gi|222851766|gb|EEE89313.1|
            predicted protein [Populus trichocarpa]
          Length = 1306

 Score =  273 bits (699), Expect = 5e-71
 Identities = 144/274 (52%), Positives = 193/274 (70%), Gaps = 2/274 (0%)
 Frame = +2

Query: 338  MAGNSRYELNSTS-SELGFVGIYPNGQRGNHFGHTLDRSGSFREGTENRIVGSGIGTSRA 514
            MAGN RY+L+S S  ELGF G + NGQRG++   + DRSGSFRE +E+R+  SG  T RA
Sbjct: 1    MAGNVRYDLSSASPEELGFTGSFSNGQRGSYPNASFDRSGSFRESSESRMFSSGASTPRA 60

Query: 515  SGTLLVELPPLPQCLMLDPILMGDQKYTRFGELRRVIGLSIGSTSEDNSFGATHLKSSPA 694
            S +    + PL Q L LDP+ MGD KYTR GEL+R  G+S+GS +EDNSFGA H K  PA
Sbjct: 61   SASPARSMGPLTQHLSLDPVTMGDPKYTRTGELKRAFGISLGSATEDNSFGAAHSKPPPA 120

Query: 695  LASEDVKSFKSSVVDTCIKARGRSRKLDEHIYKLNKYCEAITNKKQQRNEVITPERSACL 874
            +  E++K  ++ V+D   K+R R++  +E++ +L K+ E + +K QQR+E++  ERS   
Sbjct: 121  VDVEELKRIRAGVLDDYRKSRNRAKMWNENLLRLQKFPEDLNSKNQQRSEMLMNERSGGS 180

Query: 875  N-LKMGIQINQNSPDLVTQKLEDRPKTVLLNKRVRTSVAEARPECLSNGLPRQPLFLAKD 1051
            N LKMG QI++N  DL TQ+LEDR KT++LNKRVR+SVAE+R +  SN + RQPL   KD
Sbjct: 181  NFLKMGTQIHRNPSDLGTQRLEDRTKTIVLNKRVRSSVAESRVDGRSNTVLRQPLVTGKD 240

Query: 1052 RDILKETSADSDAVEKIRRLPASGEGWDKKMKRK 1153
            RDI ++    +   EK+RRLPA GEGWDKKMK+K
Sbjct: 241  RDIHRDGEVSNLTEEKVRRLPAGGEGWDKKMKKK 274


>ref|XP_002316500.1| predicted protein [Populus trichocarpa] gi|222865540|gb|EEF02671.1|
            predicted protein [Populus trichocarpa]
          Length = 1308

 Score =  265 bits (676), Expect = 2e-68
 Identities = 146/275 (53%), Positives = 191/275 (69%), Gaps = 3/275 (1%)
 Frame = +2

Query: 338  MAGNSRYELNSTS-SELGFVGIYPNGQRGNHFGHTLDRSGSFREGTENRIVGSGIGTSRA 514
            M+GN+RYEL+S S  ELGF G Y NGQRG++   + DRSGSF   +E+R+  SG  T RA
Sbjct: 1    MSGNARYELSSASPEELGFTGSYSNGQRGSYPSASFDRSGSF---SESRMFSSGASTPRA 57

Query: 515  SGTLLVELPPLPQCLMLDPILMGDQKYTRFGELRRVIGLSIGSTSEDNSFGATHLKSSPA 694
            S +    + PL   L LDP+ MGDQKYTR GELRR  G+S+GS +EDNSFGA H K  PA
Sbjct: 58   SASPARSMAPLAPYLSLDPVTMGDQKYTRTGELRRAFGISLGSATEDNSFGAAHSKPPPA 117

Query: 695  LASEDVKSFKSSVVDTCIKARGRSRKLDEHIYKLNKYCEAITNKKQQRNEVITPERSACL 874
            + +E++K  K+ V D   KAR R +  +  + + +K+ E + +K QQRNE+   ERS   
Sbjct: 118  VDAEELKRIKADVYDDNQKARNRIKMWNGCLLRCHKFSEELNSKNQQRNEMPMNERSVGS 177

Query: 875  N-LKMGIQINQNSPDLVTQKLEDRPKTVLLNKRVRTSVAEARPECLSNGLPRQPLFLAKD 1051
            N LK+G QI+++  DL TQ+LEDR KT +LNKRVR+SVAE+R +  SN +PRQPL + KD
Sbjct: 178  NFLKVGTQIHRSPSDLGTQRLEDRAKTPVLNKRVRSSVAESRADGRSNTVPRQPLVMGKD 237

Query: 1052 RDILKETSADSD-AVEKIRRLPASGEGWDKKMKRK 1153
            RDI ++    SD A EK+RRLPA GEGWD+KMK+K
Sbjct: 238  RDIHRDGGEVSDLAEEKVRRLPAGGEGWDRKMKKK 272


>emb|CAN76156.1| hypothetical protein VITISV_041487 [Vitis vinifera]
          Length = 1734

 Score =  254 bits (650), Expect = 2e-65
 Identities = 132/223 (59%), Positives = 172/223 (77%), Gaps = 3/223 (1%)
 Frame = +2

Query: 338 MAGNSRYELNS-TSSELGFVGIYPNGQRGNHFGHTLDRSGSFREGTENRIVGSGIGTSRA 514
           MAGN R+EL+S T  E GF G YPNGQRGN+    LDRSGSFREG E+R+  SG G SR 
Sbjct: 1   MAGNMRFELSSGTPEEAGFSGSYPNGQRGNYQNACLDRSGSFREGGESRLFSSGTGISRG 60

Query: 515 SGTLLV-ELPPLPQCLMLDPILMGDQKYTRFGELRRVIGLSIGSTSEDNSFGATHLKSSP 691
           + T  + +LPPL QCLML+PI + DQK +R  E+RRV+G+  GST EDNSFGA H K  P
Sbjct: 61  NATSAMGDLPPLSQCLMLEPITLRDQKCSRLVEIRRVLGIPFGSTGEDNSFGAAHSKPPP 120

Query: 692 ALASEDVKSFKSSVVDTCIKARGRSRKLDEHIYKLNKYCEAITNKKQQRNEVITPERSAC 871
            +A+E++K FK+SVVDT  KARGR ++LDE + KLNK+C+A+  +KQQRN+++  E+S  
Sbjct: 121 PVATEELKRFKASVVDTINKARGRIKRLDESMDKLNKFCDALNLRKQQRNDLLPNEKSVG 180

Query: 872 LN-LKMGIQINQNSPDLVTQKLEDRPKTVLLNKRVRTSVAEAR 997
           LN LKMG QI+++SPDLV+Q+LEDR K+V++NKRVRTS+A+ R
Sbjct: 181 LNSLKMGTQIHRSSPDLVSQRLEDRTKSVVMNKRVRTSMADIR 223



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 36/54 (66%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = +2

Query: 995  RPECLSNGLPRQPLFLAKDRDILKETSADSDAVE-KIRRLPASGEGWDKKMKRK 1153
            +PE  S+G PRQ + +AKDRD+LK+    SD VE KIRRLPA GEGWDKKMKRK
Sbjct: 595  KPEGRSSGPPRQTMVMAKDRDMLKDGGVGSDLVEEKIRRLPAGGEGWDKKMKRK 648


>ref|XP_002265763.2| PREDICTED: uncharacterized protein LOC100252823 [Vitis vinifera]
          Length = 1771

 Score =  252 bits (644), Expect = 1e-64
 Identities = 131/223 (58%), Positives = 171/223 (76%), Gaps = 3/223 (1%)
 Frame = +2

Query: 338 MAGNSRYELNS-TSSELGFVGIYPNGQRGNHFGHTLDRSGSFREGTENRIVGSGIGTSRA 514
           MAGN R+EL+S T  E GF G YPNGQRGN+    LDRSGSFREG E+R+  SG G SR 
Sbjct: 1   MAGNMRFELSSGTPEEAGFSGSYPNGQRGNYQNACLDRSGSFREGGESRLFSSGTGISRG 60

Query: 515 SGTLLV-ELPPLPQCLMLDPILMGDQKYTRFGELRRVIGLSIGSTSEDNSFGATHLKSSP 691
           + T  + +LPPL QCLML+PI + DQK +R  E+RRV+G+  GST EDNSFGA H K  P
Sbjct: 61  NATSAMGDLPPLSQCLMLEPITLRDQKCSRLVEIRRVLGIPFGSTGEDNSFGAAHSKPPP 120

Query: 692 ALASEDVKSFKSSVVDTCIKARGRSRKLDEHIYKLNKYCEAITNKKQQRNEVITPERSAC 871
            +A+E++K FK+SVVDT  KARGR ++LDE I KLNK+C+A+  +KQQRN+++  E+S  
Sbjct: 121 PVATEELKRFKASVVDTINKARGRIKRLDESIDKLNKFCDALNLRKQQRNDLLPNEKSVG 180

Query: 872 LN-LKMGIQINQNSPDLVTQKLEDRPKTVLLNKRVRTSVAEAR 997
           LN LK+G  I+++SPDLV+Q+LEDR K+V++NKRVRTS+A+ R
Sbjct: 181 LNSLKVGTHIHRSSPDLVSQRLEDRTKSVVMNKRVRTSMADIR 223



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 36/54 (66%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = +2

Query: 995  RPECLSNGLPRQPLFLAKDRDILKETSADSDAVE-KIRRLPASGEGWDKKMKRK 1153
            +PE  S+G PRQ + +AKDRD+LK+    SD VE KIRRLPA GEGWDKKMKRK
Sbjct: 553  KPEGRSSGPPRQTMVMAKDRDMLKDGGVGSDLVEEKIRRLPAGGEGWDKKMKRK 606


Top