BLASTX nr result
ID: Panax21_contig00035120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00035120
(712 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 264 1e-68
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 259 4e-67
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 252 5e-65
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 251 1e-64
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 251 1e-64
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 264 bits (675), Expect = 1e-68
Identities = 127/231 (54%), Positives = 163/231 (70%)
Frame = +1
Query: 16 QEKETLLLACSASEEEHFDKWYLDTGCSNHMCGKKELFSCLDESVRGEVNFGNKAKVPIL 195
+E+ +LL+AC A++ H + WY+DTGCSNHMCG K FS LDE+ R V FG+ +KV ++
Sbjct: 273 EEEVSLLMACHANQXTHPNLWYIDTGCSNHMCGDKSAFSDLDETFRXSVTFGDNSKVSVM 332
Query: 196 GKGKVLIRLKDDSHEHISDVFYVPSLHWNLLSMGQLSEKGLKIIIDDGVCTIENQKKELV 375
GKG V I K+ S + IS+VF+VP L NLLS+ QL EKG +I I DGVC I+++K L+
Sbjct: 333 GKGSVXIHSKEKSDQIISNVFFVPDLKTNLLSVXQLQEKGYEIFIKDGVCRIQDEKLGLI 392
Query: 376 AKVKMTKNRMFPLPLQTNLIWAFSAIVMDTNWLWHFRFGHLNFNGLRLLAKKEMVTGLPL 555
A+V MT NRMFPL L FS +MD WLWHFR+GHLNF GL+ L +K MVTGLP
Sbjct: 393 AQVNMTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQKNMVTGLPP 452
Query: 556 LGDFNQLCEGCILGKLHRDYFPVGKSRRAQQPLELVHSDICGPMETVSHGG 708
+ +Q+CE C++GK HR FP GKS R + LELVHSDICGP+ S+GG
Sbjct: 453 IXTPSQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGG 503
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 259 bits (662), Expect = 4e-67
Identities = 125/231 (54%), Positives = 159/231 (68%)
Frame = +1
Query: 16 QEKETLLLACSASEEEHFDKWYLDTGCSNHMCGKKELFSCLDESVRGEVNFGNKAKVPIL 195
+E+ +LL+AC A++ H + WY+DT CSNHMCG K FS LDE+ R V FG+ +KV ++
Sbjct: 273 EEEVSLLMACHANQGTHXNLWYIDTXCSNHMCGDKSAFSDLDETFRNSVTFGDNSKVSVM 332
Query: 196 GKGKVLIRLKDDSHEHISDVFYVPSLHWNLLSMGQLSEKGLKIIIDDGVCTIENQKKELV 375
GKG V I K+ S + IS+VF+VP L LLS+GQL EKG +I I DGVC I+++K L+
Sbjct: 333 GKGSVRIHSKEKSDKIISNVFFVPDLKTTLLSVGQLQEKGYEIFIKDGVCRIQDEKLGLI 392
Query: 376 AKVKMTKNRMFPLPLQTNLIWAFSAIVMDTNWLWHFRFGHLNFNGLRLLAKKEMVTGLPL 555
A+V MT NRMFPL L FS +MD WLWHFR+GHLNF L+ L K MVTGLP
Sbjct: 393 AQVNMTTNRMFPLYLDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXLKTLQXKNMVTGLPX 452
Query: 556 LGDFNQLCEGCILGKLHRDYFPVGKSRRAQQPLELVHSDICGPMETVSHGG 708
+ +Q+CE C+ GK HR FP GKS R + LELVHSDICGP+ S+GG
Sbjct: 453 IQTXSQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGG 503
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 252 bits (644), Expect = 5e-65
Identities = 120/236 (50%), Positives = 166/236 (70%), Gaps = 1/236 (0%)
Frame = +1
Query: 1 VETDIQEKETLLLAC-SASEEEHFDKWYLDTGCSNHMCGKKELFSCLDESVRGEVNFGNK 177
VE IQE++ LL+A E+E KWYLD+G SNHMCG+K +F+ LDESVRG V G++
Sbjct: 309 VEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368
Query: 178 AKVPILGKGKVLIRLKDDSHEHISDVFYVPSLHWNLLSMGQLSEKGLKIIIDDGVCTIEN 357
+K+ + GKG +LIRLK+ H+ IS+V+Y+PS+ N+LS+GQL EKG I + D +I +
Sbjct: 369 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428
Query: 358 QKKELVAKVKMTKNRMFPLPLQTNLIWAFSAIVMDTNWLWHFRFGHLNFNGLRLLAKKEM 537
Q+ L+ KV M+KNRMF L ++ ++ + +WLWH RFGHLNF GL LL++KEM
Sbjct: 429 QESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEM 488
Query: 538 VTGLPLLGDFNQLCEGCILGKLHRDYFPVGKSRRAQQPLELVHSDICGPMETVSHG 705
V GLP + NQ+CEGC+LGK + FP S RAQ+PLEL+H+D+CGP++ S G
Sbjct: 489 VRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 251 bits (641), Expect = 1e-64
Identities = 119/234 (50%), Positives = 165/234 (70%), Gaps = 1/234 (0%)
Frame = +1
Query: 1 VETDIQEKETLLLAC-SASEEEHFDKWYLDTGCSNHMCGKKELFSCLDESVRGEVNFGNK 177
VE IQE++ LL+A E+E KWYLD+G SNHMCG+K +F+ LDESVRG V G++
Sbjct: 271 VEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 330
Query: 178 AKVPILGKGKVLIRLKDDSHEHISDVFYVPSLHWNLLSMGQLSEKGLKIIIDDGVCTIEN 357
+K+ + GKG +LIRLK+ H+ IS+V+Y+PS+ N+LS+GQL EKG I + D +I +
Sbjct: 331 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 390
Query: 358 QKKELVAKVKMTKNRMFPLPLQTNLIWAFSAIVMDTNWLWHFRFGHLNFNGLRLLAKKEM 537
Q+ L+ KV M+KNRMF L ++ ++ + +WLWH RFGHLNF GL LL++KEM
Sbjct: 391 QESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEM 450
Query: 538 VTGLPLLGDFNQLCEGCILGKLHRDYFPVGKSRRAQQPLELVHSDICGPMETVS 699
V GLP + NQ+CEGC+LGK + FP S RAQ+PLEL+H+D+CGP++ S
Sbjct: 451 VRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKS 504
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 251 bits (640), Expect = 1e-64
Identities = 119/236 (50%), Positives = 167/236 (70%), Gaps = 1/236 (0%)
Frame = +1
Query: 1 VETDIQEKETLLLACSASEEEHFD-KWYLDTGCSNHMCGKKELFSCLDESVRGEVNFGNK 177
VE IQE++ LL+A +E+ + KWYLD+G SNHMCG+K +F+ LDESVRG V G++
Sbjct: 309 VEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 368
Query: 178 AKVPILGKGKVLIRLKDDSHEHISDVFYVPSLHWNLLSMGQLSEKGLKIIIDDGVCTIEN 357
+K+ + GKG +LIRLK+ H+ IS+V+Y+PS+ N+LS+GQL EKG I + D +I +
Sbjct: 369 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 428
Query: 358 QKKELVAKVKMTKNRMFPLPLQTNLIWAFSAIVMDTNWLWHFRFGHLNFNGLRLLAKKEM 537
Q+ L+ KV M+KNRMF L ++ ++ + +WLWH RFGHLNF GL LL++KEM
Sbjct: 429 QESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEM 488
Query: 538 VTGLPLLGDFNQLCEGCILGKLHRDYFPVGKSRRAQQPLELVHSDICGPMETVSHG 705
V GLP + NQ+CEGC+LGK + FP S RAQ+PLEL+H+D+CGP++ S G
Sbjct: 489 VRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544