BLASTX nr result

ID: Panax21_contig00035054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035054
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40086.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    55   5e-06

>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -3

Query: 262 MELDFWYDPIFGKSQISSIQFRNRYIFEECPDKIFDWVADYWDFNFEFKNSRET----TE 95
           MEL+F  +   GK   SS+ F N Y  +   DK  D   +  + + E  N ++     +E
Sbjct: 1   MELNFGGE---GKGMFSSVNFINGYFVDGFGDKSLDGFGNLLNMDCESDNPQDRRMGKSE 57

Query: 94  KN---EKVYDDIVDMLPSDPFGMDISATFTA 11
           K    E V DDIVD LP+DPF MDI  TFTA
Sbjct: 58  KEGSCEAVSDDIVDRLPADPFNMDIRTTFTA 88


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/86 (36%), Positives = 46/86 (53%)
 Frame = -3

Query: 262 MELDFWYDPIFGKSQISSIQFRNRYIFEECPDKIFDWVADYWDFNFEFKNSRETTEKNEK 83
           M L+F + P+F +    ++    R   +E  +  FD+              R+ +   E 
Sbjct: 1   MALNFSHRPLFPRLSEDNLVSPMRISIQEKVEDCFDY-------------GRDRSGSQES 47

Query: 82  VYDDIVDMLPSDPFGMDISATFTAIT 5
           V+ DI+D+LPSDPFGMDIS TFTA+T
Sbjct: 48  VHKDILDLLPSDPFGMDISTTFTAVT 73


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = -3

Query: 262 MELDFWYDPIFGKSQISSIQFRNRYIFEECPDKIFDWVADYWDFNFEFKNSRET----TE 95
           MEL+F  +   GK   SS+ F N Y  +   DK  D   +  + + E  N ++     +E
Sbjct: 1   MELNFGGE---GKGMFSSVNFINGYFVDGFGDKSLDGFGNLLNMDCESDNPQDRRMGKSE 57

Query: 94  KN---EKVYDDIVDMLPSDPFGMDISATFTA 11
           K    E V DDIVD LP+DPF MDI  TFTA
Sbjct: 58  KEGSCEAVSDDIVDRLPADPFNMDIRTTFTA 88


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