BLASTX nr result

ID: Panax21_contig00035039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035039
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313592.1| predicted protein [Populus trichocarpa] gi|2...   217   9e-55
ref|XP_002328120.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
ref|XP_002523797.1| conserved hypothetical protein [Ricinus comm...   212   4e-53
ref|XP_003538118.1| PREDICTED: F-box/LRR-repeat protein At1g6719...   210   1e-52
ref|XP_003539828.1| PREDICTED: F-box/LRR-repeat protein At1g6719...   209   2e-52

>ref|XP_002313592.1| predicted protein [Populus trichocarpa] gi|222850000|gb|EEE87547.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  217 bits (553), Expect = 9e-55
 Identities = 106/157 (67%), Positives = 125/157 (79%)
 Frame = -2

Query: 549 VVDVSSFTIIWSKFYQMISKSSKLRRLRLWXXXXXXXXXXXXXETVALCFPQLSYLALSY 370
           ++DVS+FTI+W KFYQMISKSSKL +LRLW             ET+A+CFP L +LALSY
Sbjct: 267 IIDVSNFTIMWPKFYQMISKSSKLTKLRLWDVVFDDEDEIVDLETIAVCFPHLIHLALSY 326

Query: 369 DLREDLRDGVLHNGVQGSPPLENVITLELGWTVVNDLFTDWVTSFLKRCPNLKKLIIHGV 190
           DLR    DGV++ G+QGS  LENV  LELGWT++NDLF+ WV   LK CPNL+KL+IHGV
Sbjct: 327 DLR----DGVVNYGLQGSSHLENVFVLELGWTIINDLFSHWVEGLLKLCPNLRKLVIHGV 382

Query: 189 VSEAKTHEECQMLANFTSSIVKLMRKYMHVDVHFEYE 79
           VSEAK+HEECQMLANFTSSIV+LMRKYMHVDV F+YE
Sbjct: 383 VSEAKSHEECQMLANFTSSIVQLMRKYMHVDVQFDYE 419


>ref|XP_002328120.1| predicted protein [Populus trichocarpa] gi|222837635|gb|EEE76000.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  213 bits (542), Expect = 2e-53
 Identities = 107/157 (68%), Positives = 124/157 (78%)
 Frame = -2

Query: 549 VVDVSSFTIIWSKFYQMISKSSKLRRLRLWXXXXXXXXXXXXXETVALCFPQLSYLALSY 370
           ++DVS+FTIIW KFYQMISKSSKLR+LRLW             E +A+CFP LS+LALSY
Sbjct: 267 IIDVSNFTIIWPKFYQMISKSSKLRKLRLWDVVFDDEDEIVDLENIAVCFPHLSHLALSY 326

Query: 369 DLREDLRDGVLHNGVQGSPPLENVITLELGWTVVNDLFTDWVTSFLKRCPNLKKLIIHGV 190
           DLR    DGV++ G+QGS  LE VI LELGWTV+NDLF+ WV   LK CPNLKKL+I GV
Sbjct: 327 DLR----DGVVNYGLQGSSHLEYVIILELGWTVINDLFSLWVEGLLKLCPNLKKLVIRGV 382

Query: 189 VSEAKTHEECQMLANFTSSIVKLMRKYMHVDVHFEYE 79
           VSEAK+HEECQMLANFTSS+V+LMR YMHVDV F+YE
Sbjct: 383 VSEAKSHEECQMLANFTSSMVQLMRTYMHVDVQFDYE 419


>ref|XP_002523797.1| conserved hypothetical protein [Ricinus communis]
           gi|223536885|gb|EEF38523.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  212 bits (539), Expect = 4e-53
 Identities = 107/157 (68%), Positives = 125/157 (79%)
 Frame = -2

Query: 549 VVDVSSFTIIWSKFYQMISKSSKLRRLRLWXXXXXXXXXXXXXETVALCFPQLSYLALSY 370
           +VDVS+FTIIW KFYQ+ISKSSKLRRLRLW             ET+A+ FPQLS+L+LSY
Sbjct: 267 IVDVSNFTIIWPKFYQLISKSSKLRRLRLWDVVFDDDDGIVDLETIAVYFPQLSHLSLSY 326

Query: 369 DLREDLRDGVLHNGVQGSPPLENVITLELGWTVVNDLFTDWVTSFLKRCPNLKKLIIHGV 190
           DLR    DGVL  G+QGS  L NV+ LELGWTV+NDLF+ WV   LKRCPNL+KL+I+GV
Sbjct: 327 DLR----DGVLQYGLQGSSNLVNVVVLELGWTVINDLFSHWVEGLLKRCPNLRKLVIYGV 382

Query: 189 VSEAKTHEECQMLANFTSSIVKLMRKYMHVDVHFEYE 79
           VSEAK+ EECQMLANFTSSIV+LMRKY +VDV F+YE
Sbjct: 383 VSEAKSQEECQMLANFTSSIVQLMRKYTNVDVQFQYE 419


>ref|XP_003538118.1| PREDICTED: F-box/LRR-repeat protein At1g67190-like [Glycine max]
          Length = 419

 Score =  210 bits (535), Expect = 1e-52
 Identities = 100/156 (64%), Positives = 124/156 (79%)
 Frame = -2

Query: 546 VDVSSFTIIWSKFYQMISKSSKLRRLRLWXXXXXXXXXXXXXETVALCFPQLSYLALSYD 367
           VD+S+FTIIW KFYQMIS+SS L+RLRLW             ET+A CFP LS+L+LSYD
Sbjct: 268 VDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPYLSHLSLSYD 327

Query: 366 LREDLRDGVLHNGVQGSPPLENVITLELGWTVVNDLFTDWVTSFLKRCPNLKKLIIHGVV 187
           +R    DGVLH G+QGS  LE+V+ LELGWTV+NDLF+ WV   LKRCPNLKKL+IHG+V
Sbjct: 328 VR----DGVLHYGLQGSSYLESVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIV 383

Query: 186 SEAKTHEECQMLANFTSSIVKLMRKYMHVDVHFEYE 79
           S+ K+HEECQMLANFT+S+V+LMR+Y HVD +F+Y+
Sbjct: 384 SQVKSHEECQMLANFTTSMVELMRRYTHVDPYFKYD 419


>ref|XP_003539828.1| PREDICTED: F-box/LRR-repeat protein At1g67190-like isoform 1
           [Glycine max] gi|356542752|ref|XP_003539829.1|
           PREDICTED: F-box/LRR-repeat protein At1g67190-like
           isoform 2 [Glycine max]
          Length = 419

 Score =  209 bits (533), Expect = 2e-52
 Identities = 101/156 (64%), Positives = 124/156 (79%)
 Frame = -2

Query: 546 VDVSSFTIIWSKFYQMISKSSKLRRLRLWXXXXXXXXXXXXXETVALCFPQLSYLALSYD 367
           VD+S+F IIW KFYQMIS+SS L+RLRLW             ET+A CFP LS+L+LSYD
Sbjct: 268 VDISNFPIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPYLSHLSLSYD 327

Query: 366 LREDLRDGVLHNGVQGSPPLENVITLELGWTVVNDLFTDWVTSFLKRCPNLKKLIIHGVV 187
           +R    DGVL+ G+QGS  LE+V+ LELGWTV+NDLF+ WV   LKRCPNLKKL+IHG+V
Sbjct: 328 VR----DGVLYYGLQGSSYLESVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIV 383

Query: 186 SEAKTHEECQMLANFTSSIVKLMRKYMHVDVHFEYE 79
           SEAK+HEECQMLANFT+S+V+LMR+Y HVD +F+YE
Sbjct: 384 SEAKSHEECQMLANFTTSMVELMRRYTHVDPYFKYE 419


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