BLASTX nr result

ID: Panax21_contig00035018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035018
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255...   155   7e-36
ref|XP_002512700.1| conserved hypothetical protein [Ricinus comm...   154   2e-35
ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|NP_174140.1| uncharacterized protein [Arabidopsis thaliana] ...   105   6e-21

>ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255664 [Vitis vinifera]
          Length = 272

 Score =  155 bits (392), Expect = 7e-36
 Identities = 93/185 (50%), Positives = 111/185 (60%), Gaps = 23/185 (12%)
 Frame = -2

Query: 505 MGIKF---QMIPWSY-LMGNHILCRSGFISEXXXXXXXXXPIIKVIKLDGMVKIYDRPIN 338
           MGIKF   Q IPW + LM N + C                  IK+IK DG+VKIYDRPI+
Sbjct: 1   MGIKFLNLQTIPWCFHLMSNPVSCM-----HLQPEAPEGSGTIKLIKSDGIVKIYDRPIH 55

Query: 337 VSALTVKFPKHKVCSSDSLYIGQKISALPEDDELQLGHTYFLLPIHFFQSVLTFVTVT-- 164
           VS L ++FPKH+VC SDS YIGQKI AL EDDELQLGH YFLLP HFFQSVL+FVTV   
Sbjct: 56  VSELMLEFPKHRVCHSDSFYIGQKIPALSEDDELQLGHKYFLLPKHFFQSVLSFVTVASF 115

Query: 163 -----------------XXXXXXXXXXSNCQLFEIQKTESGFLRIRVREEFISRLMMMRK 35
                                      ++CQ F+IQKT SG LRIRV +EFI++LM   K
Sbjct: 116 ASSQSHPSPDSSSLMSRDSKNAFLKKAASCQPFDIQKTPSGCLRIRVSDEFIAQLMEEGK 175

Query: 34  AEEDD 20
            +++D
Sbjct: 176 IKDED 180


>ref|XP_002512700.1| conserved hypothetical protein [Ricinus communis]
           gi|223548661|gb|EEF50152.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  154 bits (389), Expect = 2e-35
 Identities = 93/189 (49%), Positives = 111/189 (58%), Gaps = 23/189 (12%)
 Frame = -2

Query: 505 MGIKF---QMIPWSY-LMGNHILCRSGFISEXXXXXXXXXPIIKVIKLDGMVKIYDRPIN 338
           MG KF   QMIPW   LMGNHI C                  +K+IK DG+VKIYDRPI+
Sbjct: 1   MGRKFMNLQMIPWCLQLMGNHISC-------VHIRPEPPAGTVKLIKSDGLVKIYDRPIH 53

Query: 337 VSALTVKFPKHKVCSSDSLYIGQKISALPEDDELQLGHTYFLLPIHFFQSVLTFVTVTXX 158
           VS L  ++PKH VC SDS YIGQKI AL E+D+LQLGH YFLLP H FQSVL+FVT+   
Sbjct: 54  VSELLHEYPKHLVCRSDSFYIGQKIPALSENDQLQLGHKYFLLPKHCFQSVLSFVTIASF 113

Query: 157 XXXXXXXXSN-------------------CQLFEIQKTESGFLRIRVREEFISRLMMMRK 35
                    +                   C+ F+IQK+ SG LRIRV +EFIS+L+   K
Sbjct: 114 VTTSQPQLPHSSTSTPRDSTNALLKKAATCRAFDIQKSPSGCLRIRVSDEFISQLLEEGK 173

Query: 34  AEEDDQMIT 8
            EEDD+ IT
Sbjct: 174 MEEDDRKIT 182


>ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|222846621|gb|EEE84168.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  144 bits (363), Expect = 2e-32
 Identities = 87/179 (48%), Positives = 108/179 (60%), Gaps = 16/179 (8%)
 Frame = -2

Query: 505 MGIKF---QMIPWSY-LMGNHILCRSGFISEXXXXXXXXXPIIKVIKLDGMVKIYDRPIN 338
           MGI+F   Q+IPW + LMGN I C                  IK+I+ DG+VKIYDRPI 
Sbjct: 1   MGIRFLNLQIIPWCFHLMGNPISCLQ-------IQSEPPAGTIKLIRSDGLVKIYDRPIY 53

Query: 337 VSALTVKFPKHKVCSSDSLYIGQKISALPEDDELQLGHTYFLLPIHFFQSVLTFVTV--- 167
           VS L V+FPKH VC SDS YIGQKI AL E+D LQLGH YFLLP H FQSVL+FVT+   
Sbjct: 54  VSELMVEFPKHLVCHSDSFYIGQKIPALSENDLLQLGHKYFLLPKHCFQSVLSFVTIASF 113

Query: 166 ---------TXXXXXXXXXXSNCQLFEIQKTESGFLRIRVREEFISRLMMMRKAEEDDQ 17
                    +          + CQ F+I K+ +G LRIRV +EF+S+LM   K +E ++
Sbjct: 114 ASSSLQPQPSSSRNAFLKKAATCQPFDILKSPNGCLRIRVSDEFLSQLMEEGKVKESEE 172


>ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|222841169|gb|EEE78716.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  144 bits (362), Expect = 2e-32
 Identities = 87/180 (48%), Positives = 107/180 (59%), Gaps = 17/180 (9%)
 Frame = -2

Query: 505 MGIKF---QMIPWSY--LMGNHILCRSGFISEXXXXXXXXXPIIKVIKLDGMVKIYDRPI 341
           MGI+F   QMIPW +  LMGN   C                  IK+IK DG+VKIYDRP+
Sbjct: 1   MGIRFLNLQMIPWCFHNLMGNPTSCLQ-------LQSEPPAGTIKLIKSDGLVKIYDRPV 53

Query: 340 NVSALTVKFPKHKVCSSDSLYIGQKISALPEDDELQLGHTYFLLPIHFFQSVLTFVTV-- 167
            VS L V+FPKH VC SDS YIGQKI AL E+D+LQLGH YFLLP   FQSVL+FVT+  
Sbjct: 54  YVSELMVEFPKHLVCHSDSFYIGQKIPALSENDQLQLGHKYFLLPKDCFQSVLSFVTIAS 113

Query: 166 ----------TXXXXXXXXXXSNCQLFEIQKTESGFLRIRVREEFISRLMMMRKAEEDDQ 17
                     +          + CQ F+IQK+ +G LRIRV ++FIS+LM   K +E  +
Sbjct: 114 FTSSSLQPQPSSSRNAFLKKAATCQPFDIQKSPNGCLRIRVSDDFISQLMEEGKVKESGE 173


>ref|NP_174140.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9795618|gb|AAF98436.1|AC021044_15 Hypothetical
           protein [Arabidopsis thaliana]
           gi|332192808|gb|AEE30929.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 266

 Score =  105 bits (263), Expect = 6e-21
 Identities = 61/126 (48%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
 Frame = -2

Query: 391 IKVIKLDGMVKIYDRPINVSALTVKFPKHKVCSSDSLYIGQKISALPEDDELQLGHTYFL 212
           IK+++ DG +++YDRP+ VS LT  FPKHK+C SD LYIGQK   L E + L+LG  YFL
Sbjct: 39  IKLVRSDGSLQVYDRPVVVSELTKDFPKHKICRSDLLYIGQKTPVLSETETLKLGLNYFL 98

Query: 211 LPIHFFQSVLTFVTVT------XXXXXXXXXXSNCQLFEIQKTESG-FLRIRVREEFISR 53
           LP  FF++ L+F+T+                    Q F IQK E G  LRIRV EEF+S 
Sbjct: 99  LPSDFFKNDLSFLTIATLKTPQNGGVLVKKTQQQPQPFLIQKGEKGERLRIRVSEEFVSE 158

Query: 52  LMMMRK 35
           LMM  K
Sbjct: 159 LMMEGK 164


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