BLASTX nr result

ID: Panax21_contig00035004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035004
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43141.1| cyclin D2 [Daucus carota]                             368   2e-99
emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]               365   9e-99
ref|XP_002268586.1| PREDICTED: cyclin-D4-1-like [Vitis vinifera]      323   4e-86
ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]         323   7e-86
emb|CBI18712.3| unnamed protein product [Vitis vinifera]              319   1e-84

>emb|CAD43141.1| cyclin D2 [Daucus carota]
          Length = 382

 Score =  368 bits (944), Expect = 2e-99
 Identities = 192/290 (66%), Positives = 221/290 (76%)
 Frame = -1

Query: 871 FDCAAENLLCTETNSLGFDGFESVATDDQTYQTDDLSNNGRSEPLIGFFPFQNEESFCLM 692
           F+    +LLCTETN+L FD  E+    D     +++  N  SE LI   P Q +E F  +
Sbjct: 11  FNMTDHSLLCTETNNLCFDDLEARDDQDPRIDCENVVGN-ESEALICAVPLQRDEDFVFV 69

Query: 691 FEREREHFPQDDYLQRLRSGSLDLSVRREALDWICKAHSHYSFGALSFCLAINYLDRFLS 512
           FE  + +F  +      RSG LDL VR+EALDWI KAH+HY+FGALS CLA+NYLDRFLS
Sbjct: 70  FE-SKVNFCPEVIFSTDRSGELDLCVRKEALDWIYKAHAHYNFGALSVCLAVNYLDRFLS 128

Query: 511 VYELPRGKTWTVQLLAVACLSLAAKLEEITVPLTVDLQVGDPKFVFEGKTIKRMELLVLC 332
           +YELP GK WTVQLLAVACLSLAAK+EE+ VPLTVDLQV DPKFVFE KTIKRMELLVL 
Sbjct: 129 LYELPSGKKWTVQLLAVACLSLAAKMEEVNVPLTVDLQVADPKFVFEAKTIKRMELLVLS 188

Query: 331 TLKWRMQACTPCSFIDYFLKKINNGDIFPSGSLIPRSIQLILSTAKGIDFLEFKPSEISA 152
           TLKWRMQACTPCSFIDYFL+KINN D  PSGSLI RSIQ IL T KGIDFLEF+PSEISA
Sbjct: 189 TLKWRMQACTPCSFIDYFLRKINNADALPSGSLIDRSIQFILKTMKGIDFLEFRPSEISA 248

Query: 151 AVAMCVSGEIQALDTDKAMSVFRHVEKVRVLKCLELIQDLKLISEATNVA 2
           AVA+CV+ E Q LD +KAMS    VEK RV KC+E+IQDL L++E +NVA
Sbjct: 249 AVAICVTREAQTLDINKAMSNIIPVEKDRVFKCIEMIQDLTLVTETSNVA 298


>emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
          Length = 354

 Score =  365 bits (938), Expect = 9e-99
 Identities = 202/299 (67%), Positives = 229/299 (76%), Gaps = 5/299 (1%)
 Frame = -1

Query: 883 ADLSFDCAAENLLCTETNSLGFDGFESVATDDQTYQTD--DLS-NNG-RSEPLIGFFPFQ 716
           AD  +D  A NLLCTET SL FD  +S+    Q  +T   DLS NNG RSEPLI   P  
Sbjct: 3   ADNIYDFVASNLLCTETKSLCFDDVDSLTISQQNIETKSKDLSFNNGIRSEPLIDL-PSL 61

Query: 715 NEESFCLMFEREREHFPQDDYLQRLRSGSLDLSVRREALDWICKAHSHYSFGALSFCLAI 536
           +EE    M +RE E  P+DDY++RLRSG LDLSVR+EALDWI KAH HY FG LSFCL+I
Sbjct: 62  SEECLSFMVQREMEFLPKDDYVERLRSGDLDLSVRKEALDWILKAHMHYGFGELSFCLSI 121

Query: 535 NYLDRFLSVYELPRGKTWTVQLLAVACLSLAAKLEEITVPLTVDLQVGDPKFVFEGKTIK 356
           NYLDRFLS+YELPR KTWTVQLLAVACLSLAAK+EEI VPLTVDLQVGDPKFVFEGKTI+
Sbjct: 122 NYLDRFLSLYELPRSKTWTVQLLAVACLSLAAKMEEINVPLTVDLQVGDPKFVFEGKTIQ 181

Query: 355 RMELLVLCTLKWRMQACTPCSFIDYFLKKINNGDIFPSGSLIPRSIQLILSTAKGIDFLE 176
           RMELLVL TLKWRMQA TP +FIDYF++K+ NGD  PS  LI  S+QLILS  + IDFLE
Sbjct: 182 RMELLVLSTLKWRMQAYTPYTFIDYFMRKM-NGDQIPSRPLISGSMQLILSIIRSIDFLE 240

Query: 175 FKPSEISAAVAMCVSGEIQALDTDKAM-SVFRHVEKVRVLKCLELIQDLKLISEATNVA 2
           F+ SEI+A+VAM VSGEIQA D DKAM   F H++K RV KC+ELIQDL   +  T  A
Sbjct: 241 FRSSEIAASVAMSVSGEIQAKDIDKAMPCFFIHLDKGRVQKCVELIQDLTTATITTAAA 299


>ref|XP_002268586.1| PREDICTED: cyclin-D4-1-like [Vitis vinifera]
          Length = 352

 Score =  323 bits (829), Expect = 4e-86
 Identities = 175/296 (59%), Positives = 219/296 (73%), Gaps = 6/296 (2%)
 Frame = -1

Query: 871 FDCAAENLLCTETNSLGFDGFESVATDD------QTYQTDDLSNNGRSEPLIGFFPFQNE 710
           FD +  +LLC+ET+++ FD  +  A D+      Q +  + +  N RSE  I   P  +E
Sbjct: 5   FDYSVSSLLCSETHTVCFDDLDCNAIDEFFPWNFQNHYQNPIFRNSRSESWIEC-PMLSE 63

Query: 709 ESFCLMFEREREHFPQDDYLQRLRSGSLDLSVRREALDWICKAHSHYSFGALSFCLAINY 530
           E    M ERE E+ P+DDYL RLRSG LDL VRREA+DWI KAH+ + FG LS  L+IN+
Sbjct: 64  ERLREMVEREGEYMPRDDYLGRLRSGDLDLGVRREAVDWILKAHACHGFGPLSLYLSINF 123

Query: 529 LDRFLSVYELPRGKTWTVQLLAVACLSLAAKLEEITVPLTVDLQVGDPKFVFEGKTIKRM 350
           LDR LSVY+LP  + W V+LL+VACLS+AAK+EE  VPL+++LQVGDP+ +FE KTI+RM
Sbjct: 124 LDRVLSVYQLPTRRPWIVRLLSVACLSVAAKVEETNVPLSIELQVGDPRLMFEAKTIRRM 183

Query: 349 ELLVLCTLKWRMQACTPCSFIDYFLKKINNGDIFPSGSLIPRSIQLILSTAKGIDFLEFK 170
           ELLVL  LKW+MQA TPCSFIDYFL K+N+   +PSGSLI RSIQLILST KGIDFLEFK
Sbjct: 184 ELLVLTHLKWKMQAFTPCSFIDYFLSKVNDHK-YPSGSLISRSIQLILSTIKGIDFLEFK 242

Query: 169 PSEISAAVAMCVSGEIQALDTDKAMSVFRHVEKVRVLKCLELIQDLKLISEATNVA 2
            SEI+AAVA+CVS EIQ  D DKAMS   HV++ RVLKC++LIQ+  L+  +T VA
Sbjct: 243 ASEIAAAVAICVSEEIQ--DIDKAMSCLIHVDEGRVLKCVQLIQNAALLGASTEVA 296


>ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 361

 Score =  323 bits (827), Expect = 7e-86
 Identities = 178/303 (58%), Positives = 218/303 (71%), Gaps = 9/303 (2%)
 Frame = -1

Query: 886 MADLSFDCAAENLLCTETNSLGFDG-FESVATDD--------QTYQTDDLSNNGRSEPLI 734
           MA  S    +  LLC+E +S  FD   E     D        Q +   +    G SE L+
Sbjct: 1   MAHNSDSATSNLLLCSENSSTCFDDDLECCDAADGSNSRISHQFWDHHEGGGGGGSE-LL 59

Query: 733 GFFPFQNEESFCLMFEREREHFPQDDYLQRLRSGSLDLSVRREALDWICKAHSHYSFGAL 554
             F  Q+EE+   M EREREH P+DDYL RLRSG LDL VRREA+DWICKAHS++ FG L
Sbjct: 60  ACFVAQSEETVRAMVEREREHLPRDDYLMRLRSGELDLGVRREAIDWICKAHSYFGFGPL 119

Query: 553 SFCLAINYLDRFLSVYELPRGKTWTVQLLAVACLSLAAKLEEITVPLTVDLQVGDPKFVF 374
           SFCLA+NYLDRFLSV++LPRG TWTVQLLAVACLS+AAK+EEI VP +VDLQVG+PKFVF
Sbjct: 120 SFCLAVNYLDRFLSVFDLPRGVTWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGEPKFVF 179

Query: 373 EGKTIKRMELLVLCTLKWRMQACTPCSFIDYFLKKINNGDIFPSGSLIPRSIQLILSTAK 194
           E +TI++MELLVL TL W+M A TPCSFIDYFL KI   +  P+ S +  S+QLIL    
Sbjct: 180 EARTIQKMELLVLSTLGWKMCAITPCSFIDYFLGKI-TCEQHPAKSSVSISVQLILGIIM 238

Query: 193 GIDFLEFKPSEISAAVAMCVSGEIQALDTDKAMSVFRHVEKVRVLKCLELIQDLKLISEA 14
           GID+LEF+PSEI+AAVA+ V  E+QA++ DKA+     VEKVRVLKC+ELI+DL LI+ A
Sbjct: 239 GIDYLEFRPSEIAAAVAVSVLKELQAIEIDKAIIDLLVVEKVRVLKCVELIRDLSLINVA 298

Query: 13  TNV 5
            ++
Sbjct: 299 ASL 301


>emb|CBI18712.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  319 bits (817), Expect = 1e-84
 Identities = 175/297 (58%), Positives = 219/297 (73%), Gaps = 7/297 (2%)
 Frame = -1

Query: 871 FDCAAENLLCTETNSLGFDGFESVATDD------QTYQTDDLSNNGRSEPLIGFFPFQNE 710
           FD +  +LLC+ET+++ FD  +  A D+      Q +  + +  N RSE  I   P  +E
Sbjct: 5   FDYSVSSLLCSETHTVCFDDLDCNAIDEFFPWNFQNHYQNPIFRNSRSESWIEC-PMLSE 63

Query: 709 ESFCLMFEREREHFPQDDYLQRLRSGSLDLSVRREALDWICKAHSHYSFGALSFCLAINY 530
           E    M ERE E+ P+DDYL RLRSG LDL VRREA+DWI KAH+ + FG LS  L+IN+
Sbjct: 64  ERLREMVEREGEYMPRDDYLGRLRSGDLDLGVRREAVDWILKAHACHGFGPLSLYLSINF 123

Query: 529 LDRFLSVYELPRGKTWTVQLLAVACLSLAAKLEEITVPLTVDLQ-VGDPKFVFEGKTIKR 353
           LDR LSVY+LP  + W V+LL+VACLS+AAK+EE  VPL+++LQ VGDP+ +FE KTI+R
Sbjct: 124 LDRVLSVYQLPTRRPWIVRLLSVACLSVAAKVEETNVPLSIELQEVGDPRLMFEAKTIRR 183

Query: 352 MELLVLCTLKWRMQACTPCSFIDYFLKKINNGDIFPSGSLIPRSIQLILSTAKGIDFLEF 173
           MELLVL  LKW+MQA TPCSFIDYFL K+N+   +PSGSLI RSIQLILST KGIDFLEF
Sbjct: 184 MELLVLTHLKWKMQAFTPCSFIDYFLSKVNDHK-YPSGSLISRSIQLILSTIKGIDFLEF 242

Query: 172 KPSEISAAVAMCVSGEIQALDTDKAMSVFRHVEKVRVLKCLELIQDLKLISEATNVA 2
           K SEI+AAVA+CVS EIQ  D DKAMS   HV++ RVLKC++LIQ+  L+  +T VA
Sbjct: 243 KASEIAAAVAICVSEEIQ--DIDKAMSCLIHVDEGRVLKCVQLIQNAALLGASTEVA 297


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