BLASTX nr result

ID: Panax21_contig00035003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00035003
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277802.1| PREDICTED: UDP-glucuronic acid decarboxylase...   231   6e-59
emb|CBI32663.3| unnamed protein product [Vitis vinifera]              224   7e-57
ref|XP_004137768.1| PREDICTED: UDP-glucuronic acid decarboxylase...   222   4e-56
gb|ACI46983.1| UDP-glucuronic acid decarboxylase 1 [Gossypium hi...   218   5e-55
ref|XP_002876209.1| UDP-glucuronic acid decarboxylase 1 [Arabido...   206   3e-51

>ref|XP_002277802.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 1
           [Vitis vinifera]
          Length = 437

 Score =  231 bits (589), Expect = 6e-59
 Identities = 120/181 (66%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
 Frame = -1

Query: 538 MKQLHKHSPYSHKRDIEMPPTNSYPYSPKSIKHQRSLPRSINHIFKEQRILFIFVGILIG 359
           MKQLHK S  +H+RD E+P + S PYSPK++KH RSLPRSIN++FKEQR+LFI VGILIG
Sbjct: 1   MKQLHKQSSVNHRRDEEIPTSQSPPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIG 60

Query: 358 STFFIIQPSLSRL--VXXXXXXXXXXXXSNADHESVLKPFRKNYGVIGKIEVATGRIPVG 185
           STFFI+QPSLSRL                    + +  P+ ++ G  GK+    GRIPVG
Sbjct: 61  STFFIVQPSLSRLGPAETRSTIPRSVTIGVTSRDQISIPYPQSNGA-GKV----GRIPVG 115

Query: 184 IGRKRLRIVVTGGAGFVGSHLVDKLIARGDNVTVTDNFFTGRKDNVMHHFGNPRFELIRH 5
           IGR+RLRIVVTGGAGFVGSHLVDKLIARGD+V V DNFFTGRK+NVMHHFGNPRFELIRH
Sbjct: 116 IGRRRLRIVVTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENVMHHFGNPRFELIRH 175

Query: 4   D 2
           D
Sbjct: 176 D 176


>emb|CBI32663.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  224 bits (571), Expect = 7e-57
 Identities = 117/184 (63%), Positives = 137/184 (74%)
 Frame = -1

Query: 553 SIKQNMKQLHKHSPYSHKRDIEMPPTNSYPYSPKSIKHQRSLPRSINHIFKEQRILFIFV 374
           S+ Q MKQLHK S  +H+RD E+P + S PYSPK++KH RSLPRSIN++FKEQR+LFI V
Sbjct: 104 SLSQAMKQLHKQSSVNHRRDEEIPTSQSPPYSPKTLKHPRSLPRSINYLFKEQRLLFILV 163

Query: 373 GILIGSTFFIIQPSLSRLVXXXXXXXXXXXXSNADHESVLKPFRKNYGVIGKIEVATGRI 194
           GILIGSTFFI+QP+                        +  P+ ++ G  GK+    GRI
Sbjct: 164 GILIGSTFFIVQPN-----------------------QISIPYPQSNGA-GKV----GRI 195

Query: 193 PVGIGRKRLRIVVTGGAGFVGSHLVDKLIARGDNVTVTDNFFTGRKDNVMHHFGNPRFEL 14
           PVGIGR+RLRIVVTGGAGFVGSHLVDKLIARGD+V V DNFFTGRK+NVMHHFGNPRFEL
Sbjct: 196 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENVMHHFGNPRFEL 255

Query: 13  IRHD 2
           IRHD
Sbjct: 256 IRHD 259


>ref|XP_004137768.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
           sativus] gi|449517780|ref|XP_004165922.1| PREDICTED:
           UDP-glucuronic acid decarboxylase 1-like [Cucumis
           sativus]
          Length = 438

 Score =  222 bits (565), Expect = 4e-56
 Identities = 113/183 (61%), Positives = 136/183 (74%), Gaps = 2/183 (1%)
 Frame = -1

Query: 544 QNMKQLHKHSPYSHKRDIEMPPTNSYPYSPKSIKHQRSLPRSINHIFKEQRILFIFVGIL 365
           Q++KQLHK S  +H+RD E+PP  + PYSPK++KH RSLPRSIN++F+EQR+LF+FVGIL
Sbjct: 2   QSIKQLHKQSSINHRRDEEVPPVPTSPYSPKALKHPRSLPRSINYLFREQRLLFVFVGIL 61

Query: 364 IGSTFFIIQPSLSRLVXXXXXXXXXXXXSN--ADHESVLKPFRKNYGVIGKIEVATGRIP 191
           IGSTFFI+QPSLSR+             +      + V       +G  G      GR+P
Sbjct: 62  IGSTFFILQPSLSRIGPSEAGSAIRRSFATGLTSRDQVSGSGIYGFGKTG------GRVP 115

Query: 190 VGIGRKRLRIVVTGGAGFVGSHLVDKLIARGDNVTVTDNFFTGRKDNVMHHFGNPRFELI 11
           VGIGR+RLRIVVTGGAGFVGSHLVDKLI RGD+V V DNFFTGRKDN++HH GNPRFELI
Sbjct: 116 VGIGRRRLRIVVTGGAGFVGSHLVDKLIERGDDVIVIDNFFTGRKDNLVHHLGNPRFELI 175

Query: 10  RHD 2
           RHD
Sbjct: 176 RHD 178


>gb|ACI46983.1| UDP-glucuronic acid decarboxylase 1 [Gossypium hirsutum]
          Length = 436

 Score =  218 bits (555), Expect = 5e-55
 Identities = 117/188 (62%), Positives = 135/188 (71%), Gaps = 9/188 (4%)
 Frame = -1

Query: 538 MKQLHKHSPYSHKRDIEMPPTNSYPYSPKSIKHQRSLPRSINHIFKEQRILFIFVGILIG 359
           MKQLHK S  +H+RD E+    + PYSPKS+KH RSLPRSIN++FKEQR+LFIF+GILIG
Sbjct: 1   MKQLHKQSSINHRRDEEILIPQTPPYSPKSLKHPRSLPRSINYLFKEQRLLFIFIGILIG 60

Query: 358 STFFIIQPSLSRLVXXXXXXXXXXXXSNADHESVLKPFRKN-------YGVIGK--IEVA 206
           STFFI+QP+LSRL                 H SV K F  N       + V  +  I   
Sbjct: 61  STFFILQPTLSRL------------GPTETHPSVPKSFSNNVVSHTQEFSVSNQNPIHGK 108

Query: 205 TGRIPVGIGRKRLRIVVTGGAGFVGSHLVDKLIARGDNVTVTDNFFTGRKDNVMHHFGNP 26
            GR+PVGIGR+R+RIVVTGGAGFVGSHLVDKLI RGD V V DNFFTGRK+NV+H FGNP
Sbjct: 109 MGRVPVGIGRRRMRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENVVHLFGNP 168

Query: 25  RFELIRHD 2
           RFELIRHD
Sbjct: 169 RFELIRHD 176


>ref|XP_002876209.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis lyrata subsp.
           lyrata] gi|297322047|gb|EFH52468.1| UDP-glucuronic acid
           decarboxylase 1 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  206 bits (523), Expect = 3e-51
 Identities = 115/180 (63%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
 Frame = -1

Query: 538 MKQLHKHSPYSHKRDIE-MPPTNSYPYSPKSIKHQRSLPRSINHIFKEQRILFIFVGILI 362
           MKQLHK    S KRD E +P + S PYSPK++KH RSLPRS++++F+EQR+LFI VGILI
Sbjct: 1   MKQLHKQM--SSKRDEETIPMSQSSPYSPKTLKHPRSLPRSLHYLFREQRLLFILVGILI 58

Query: 361 GSTFFIIQPSLSRLVXXXXXXXXXXXXSNADHESVLKPFRKNYGVIGKIEVATGRIPVGI 182
           GSTFFI+QPSLSRL             S A  +S       N G  G+    TGR+PVGI
Sbjct: 59  GSTFFILQPSLSRLGAAESTSLITRSVSYAVSDSPPSMKTFNSGGGGR----TGRVPVGI 114

Query: 181 GRKRLRIVVTGGAGFVGSHLVDKLIARGDNVTVTDNFFTGRKDNVMHHFGNPRFELIRHD 2
           GRKRLRIVVTGGAGFVGSHLVDKLI RGD V V DNFFTGRK+N++H F NPRFELIRHD
Sbjct: 115 GRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHD 174


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