BLASTX nr result

ID: Panax21_contig00034982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034982
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82138.1| proteasome component [Oryza sativa Indica Group]        61   1e-07
ref|XP_004145441.1| PREDICTED: proteasome subunit alpha type-2-B...    60   1e-07
gb|ABB16986.1| unknown [Solanum tuberosum]                             60   1e-07
gb|ABA81880.1| unknown [Solanum tuberosum]                             60   1e-07
ref|NP_001047516.1| Os02g0634900 [Oryza sativa Japonica Group] g...    60   1e-07

>gb|AAB82138.1| proteasome component [Oryza sativa Indica Group]
          Length = 261

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = +3

Query: 300 MDHSQYYFPLTTFTHFGRLVPVEHTLTAAGFGQTPLGIKAANGVF 434
           M  SQY F LTTF+  G+LV + H LTA G GQT LGIKAANGVF
Sbjct: 1   MGDSQYSFSLTTFSPSGKLVQINHALTAVGSGQTSLGIKAANGVF 45


>ref|XP_004145441.1| PREDICTED: proteasome subunit alpha type-2-B-like [Cucumis sativus]
           gi|449487656|ref|XP_004157735.1| PREDICTED: proteasome
           subunit alpha type-2-B-like [Cucumis sativus]
          Length = 235

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +3

Query: 300 MDHSQYYFPLTTFTHFGRLVPVEHTLTAAGFGQTPLGIKAANGV 431
           M  SQY F LTTF+  G+LV +EH LTA G GQT LGIKAANGV
Sbjct: 1   MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGV 44


>gb|ABB16986.1| unknown [Solanum tuberosum]
          Length = 193

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +3

Query: 300 MDHSQYYFPLTTFTHFGRLVPVEHTLTAAGFGQTPLGIKAANGV 431
           M  SQY F LTTF+  G+LV +EH LTA G GQT LGIKAANGV
Sbjct: 1   MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGV 44


>gb|ABA81880.1| unknown [Solanum tuberosum]
          Length = 235

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +3

Query: 300 MDHSQYYFPLTTFTHFGRLVPVEHTLTAAGFGQTPLGIKAANGV 431
           M  SQY F LTTF+  G+LV +EH LTA G GQT LGIKAANGV
Sbjct: 1   MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGV 44


>ref|NP_001047516.1| Os02g0634900 [Oryza sativa Japonica Group]
           gi|49387541|dbj|BAD25097.1| alpha 2 subunit of 20S
           proteasome [Oryza sativa Japonica Group]
           gi|113537047|dbj|BAF09430.1| Os02g0634900 [Oryza sativa
           Japonica Group] gi|215741147|dbj|BAG97642.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765416|dbj|BAG87113.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218191233|gb|EEC73660.1| hypothetical protein
           OsI_08192 [Oryza sativa Indica Group]
           gi|222623303|gb|EEE57435.1| hypothetical protein
           OsJ_07639 [Oryza sativa Japonica Group]
          Length = 235

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +3

Query: 300 MDHSQYYFPLTTFTHFGRLVPVEHTLTAAGFGQTPLGIKAANGV 431
           M  SQY F LTTF+  G+LV +EH LTA G GQT LGIKAANGV
Sbjct: 1   MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGV 44


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