BLASTX nr result

ID: Panax21_contig00034958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034958
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...   253   4e-65
emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]   253   4e-65
ref|XP_002521591.1| GATA transcription factor, putative [Ricinus...   221   9e-56
ref|XP_002310237.1| predicted protein [Populus trichocarpa] gi|2...   219   3e-55
ref|XP_003538853.1| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...   214   1e-53

>ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 18-like
           [Vitis vinifera]
          Length = 294

 Score =  253 bits (645), Expect = 4e-65
 Identities = 137/218 (62%), Positives = 155/218 (71%), Gaps = 5/218 (2%)
 Frame = +2

Query: 23  AVDCTLSLGTPSTRLXXXXXXXXXXGKAVAVQHERRS-SYMPNFCWDILQPKHAPSPPPT 199
           +VDCTLSLGTPSTRL               + H+RR+ S + NFCWDILQ KH PS P T
Sbjct: 99  SVDCTLSLGTPSTRLTDNDEKR--------MHHDRRAGSCVSNFCWDILQSKHTPSAP-T 149

Query: 200 HHNKSSRGGAH--TANISGVDPLLARRCANCNTTSTPLWRNGPRGPKSLCNACGIRFKKE 373
           H  K SRGG+   ++N S  DPLLARRCANC+TTSTPLWRNGPRGPKSLCNACGIRFKKE
Sbjct: 150 H--KPSRGGSSGSSSNNSAGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKE 207

Query: 374 ERRXXXXXXXXXXXXXXXXXXXXIMESQHMI--NTSNSWVHHQYPQSTAQKIPCLSPSFG 547
           ERR                    +ME QH++  + +NSWVHH    S  QK+PCLSP+ G
Sbjct: 208 ERR-------ATAAAATTGATAGVMEPQHIMISHHNNSWVHH----SQTQKMPCLSPAMG 256

Query: 548 NEFRFMEDDDRDSETGIPFLSWRLNVTDRPSLVHDFTR 661
           NEFRF+EDDDRDS+TGIPFLSWRLNVTDRPSLVHDFTR
Sbjct: 257 NEFRFIEDDDRDSDTGIPFLSWRLNVTDRPSLVHDFTR 294


>emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]
          Length = 324

 Score =  253 bits (645), Expect = 4e-65
 Identities = 137/218 (62%), Positives = 155/218 (71%), Gaps = 5/218 (2%)
 Frame = +2

Query: 23  AVDCTLSLGTPSTRLXXXXXXXXXXGKAVAVQHERRS-SYMPNFCWDILQPKHAPSPPPT 199
           +VDCTLSLGTPSTRL               + H+RR+ S + NFCWDILQ KH PS P T
Sbjct: 129 SVDCTLSLGTPSTRLTDNDEKR--------MHHDRRAGSCVSNFCWDILQXKHTPSAP-T 179

Query: 200 HHNKSSRGGAH--TANISGVDPLLARRCANCNTTSTPLWRNGPRGPKSLCNACGIRFKKE 373
           H  K SRGG+   ++N S  DPLLARRCANC+TTSTPLWRNGPRGPKSLCNACGIRFKKE
Sbjct: 180 H--KPSRGGSSGSSSNNSAGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKE 237

Query: 374 ERRXXXXXXXXXXXXXXXXXXXXIMESQHMI--NTSNSWVHHQYPQSTAQKIPCLSPSFG 547
           ERR                    +ME QH++  + +NSWVHH    S  QK+PCLSP+ G
Sbjct: 238 ERR-------ATAAAATTGATAGVMEPQHIMISHHNNSWVHH----SQTQKMPCLSPAMG 286

Query: 548 NEFRFMEDDDRDSETGIPFLSWRLNVTDRPSLVHDFTR 661
           NEFRF+EDDDRDS+TGIPFLSWRLNVTDRPSLVHDFTR
Sbjct: 287 NEFRFIEDDDRDSDTGIPFLSWRLNVTDRPSLVHDFTR 324


>ref|XP_002521591.1| GATA transcription factor, putative [Ricinus communis]
           gi|223539269|gb|EEF40862.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 332

 Score =  221 bits (564), Expect = 9e-56
 Identities = 123/216 (56%), Positives = 139/216 (64%), Gaps = 3/216 (1%)
 Frame = +2

Query: 23  AVDCTLSLGTPSTRLXXXXXXXXXXGKAVAVQHERR-SSYMPNFCWDILQPKHAPSPPPT 199
           +VDCTLSLGTPSTRL              ++ H+RR +S M NFCWDILQ K+ P  P  
Sbjct: 138 SVDCTLSLGTPSTRLCEDDDKR-------SICHDRRPTSCMSNFCWDILQNKNTPYSPQ- 189

Query: 200 HHNKSSRGGAHTANISGV--DPLLARRCANCNTTSTPLWRNGPRGPKSLCNACGIRFKKE 373
           +H  ++RG   T N +    DPLLARRCANC+TTSTPLWRNGPRGPKSLCNACGIRFKKE
Sbjct: 190 NHKTTARGSNTTTNSNSANNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKE 249

Query: 374 ERRXXXXXXXXXXXXXXXXXXXXIMESQHMINTSNSWVHHQYPQSTAQKIPCLSPSFGNE 553
           ERR                        QH    +NSWV         QK+ C SP+  NE
Sbjct: 250 ERRATAANNASSNAGSTSSGTM----EQHYAYQNNSWVQ-------TQKMQCFSPA--NE 296

Query: 554 FRFMEDDDRDSETGIPFLSWRLNVTDRPSLVHDFTR 661
           FRF+ED DRDS+TGIPFLSWRLNVTDRPSLVHDFTR
Sbjct: 297 FRFIEDSDRDSDTGIPFLSWRLNVTDRPSLVHDFTR 332


>ref|XP_002310237.1| predicted protein [Populus trichocarpa] gi|222853140|gb|EEE90687.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  219 bits (559), Expect = 3e-55
 Identities = 123/221 (55%), Positives = 144/221 (65%), Gaps = 8/221 (3%)
 Frame = +2

Query: 23  AVDCTLSLGTPSTRLXXXXXXXXXXGKAVAVQHERRSSYMPNFCWDILQPKHAPSPPPTH 202
           +VDCTLSLGTPSTRL           K +     R  S M NFCWDILQ K+  +P P  
Sbjct: 54  SVDCTLSLGTPSTRLSEDDE------KRMRHDQRRSGSCMSNFCWDILQTKNNSTPYPPQ 107

Query: 203 HNKSSRGGAHTA-----NISGVDPLLARRCANCNTTSTPLWRNGPRGPKSLCNACGIRFK 367
            +K+SRG ++++     N++  DPLLARRCANC+TTSTPLWRNGPRGPKSLCNACGIRFK
Sbjct: 108 AHKTSRGSSNSSHNSNNNLANNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 167

Query: 368 KEERRXXXXXXXXXXXXXXXXXXXXIMESQHMINTSNSWVHHQYPQSTAQKIPCLSPSFG 547
           KEERR                     ME  +  + +NSWV         QK+PC SP+  
Sbjct: 168 KEERR-------ATAASANNASASGAMEQHYGYHQNNSWVQ-------TQKMPCFSPA-- 211

Query: 548 NEFRFMEDDDRDSETG--IPFLSWRLNVTDRPS-LVHDFTR 661
           NEFRF+ED+DRDS+TG  IPFLSWRLNVTDRPS LVHDFTR
Sbjct: 212 NEFRFIEDNDRDSDTGNNIPFLSWRLNVTDRPSQLVHDFTR 252


>ref|XP_003538853.1| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 18-like,
           partial [Glycine max]
          Length = 257

 Score =  214 bits (545), Expect = 1e-53
 Identities = 123/214 (57%), Positives = 138/214 (64%), Gaps = 1/214 (0%)
 Frame = +2

Query: 23  AVDCTLSLGTPSTRLXXXXXXXXXXGKAVAVQHERRSSYMPNFCWDILQPKHAPSPPPTH 202
           +VDCTLSLGTPSTR                 +HERRS  + NFCWD+LQ KH     P  
Sbjct: 74  SVDCTLSLGTPSTRFSEDEEKRS--------RHERRS--VSNFCWDLLQSKHNN---PQS 120

Query: 203 HNKSSRGGAHTANISGVDPLLARRCANCNTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 382
           H+KSSR    T N +  DPLLARRCANC+TTSTPLWRNGPRGPKSLCNACGIRFKKEERR
Sbjct: 121 HSKSSR----TTNTT--DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR 174

Query: 383 XXXXXXXXXXXXXXXXXXXXIMESQHMINTSNSWVHHQYPQSTAQKIPCLSPSFGNEFRF 562
                               +MES  + N  NSW  HQ     +QK+ C SP  GNEFRF
Sbjct: 175 -----ASAAAATPASAASGGVMESAQVYN--NSWYAHQ----QSQKMQCFSPGMGNEFRF 223

Query: 563 MEDDDRD-SETGIPFLSWRLNVTDRPSLVHDFTR 661
           ++D DRD ++ GIPFLSWRLNVTDR SLVHDFTR
Sbjct: 224 VDDADRDAADNGIPFLSWRLNVTDRTSLVHDFTR 257


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