BLASTX nr result

ID: Panax21_contig00034945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034945
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29694.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852...   166   3e-39
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...   163   2e-38
emb|CAN72659.1| hypothetical protein VITISV_042717 [Vitis vinifera]   136   3e-30

>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  177 bits (449), Expect = 1e-42
 Identities = 104/196 (53%), Positives = 131/196 (66%), Gaps = 3/196 (1%)
 Frame = +3

Query: 3   EKRRVSTIMYVLRDTAKSTLGKDKSTYVMVPKCDDQQISEKSV-LATASGTENLEAENGV 179
           EKRR+ST MYVLRDTAKST  KDKST+++VPK DDQ +S+KSV LA   G E LE E+GV
Sbjct: 204 EKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGV 263

Query: 180 FGTTXXXXXXXXXXXXXXXXXXXXXPHVSGGLSLQQNSASPVKNSIGVSAVRQNHRREAS 359
            G                         +S  L LQQN  SPVKN +G +A +QN RRE S
Sbjct: 264 SGAVDAGKKKVLLLKGKER-------EISHHL-LQQNVTSPVKNILGANAPKQNQRREGS 315

Query: 360 GKIIRSILLNKDSRQN-LSVHHSETQIQASNQEKDKRAPRPPNVQLFLRDTNGVPEDR-V 533
           G+IIRSILLNKD+RQ+  S+  +E Q QASN EK+KR PRPP++QL  ++TNG  +D+ V
Sbjct: 316 GRIIRSILLNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVV 375

Query: 534 ANELHGTCTEKQEKRT 581
            N++H   +EKQ+KRT
Sbjct: 376 GNDVHSFVSEKQDKRT 391


>ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|222839085|gb|EEE77436.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  170 bits (431), Expect = 1e-40
 Identities = 103/195 (52%), Positives = 126/195 (64%), Gaps = 2/195 (1%)
 Frame = +3

Query: 3   EKRRVSTIMYVLRDTAKSTLGKDKSTYVMVPKCDDQQISEKSVLATASGTENLEAENGVF 182
           EK+R+ST MYVLRDTAKST GKDKSTYV VPK DDQQ+S    L + SGT  LE E+ V 
Sbjct: 204 EKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVTLGSGSGTAVLEDESVVS 263

Query: 183 GTTXXXXXXXXXXXXXXXXXXXXXPHVSGGLSLQQNSASPVKNSIGVSAVRQNHRREASG 362
           G T                       V+G +S QQ+ +S  +N I  +A++ + RRE SG
Sbjct: 264 GITDSGKKKILLLKGKEKEISL----VTGTMSQQQSISSSDRNIISSTALK-SQRRETSG 318

Query: 363 KIIRSILLNKDSRQ-NLSVHHSETQIQASNQEKDKRAPRPPNVQLFLRDTNGVPEDR-VA 536
           ++IRSILLNKDSR    S  HSE Q+Q SN EK+KR PRPP+ QL L+D NG P+D+ V 
Sbjct: 319 RMIRSILLNKDSRHIRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVG 378

Query: 537 NELHGTCTEKQEKRT 581
           N+LHG   EKQEKRT
Sbjct: 379 NDLHGFPNEKQEKRT 393


>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
          Length = 322

 Score =  166 bits (420), Expect = 3e-39
 Identities = 98/188 (52%), Positives = 124/188 (65%), Gaps = 3/188 (1%)
 Frame = +3

Query: 27  MYVLRDTAKSTLGKDKSTYVMVPKCDDQQISEKSV-LATASGTENLEAENGVFGTTXXXX 203
           MYVLRDTAKST  KDKST+++VPK DDQ +S+KSV LA   G E LE E+GV G      
Sbjct: 1   MYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGK 60

Query: 204 XXXXXXXXXXXXXXXXXPHVSGGLSLQQNSASPVKNSIGVSAVRQNHRREASGKIIRSIL 383
                              +S  L LQQN  SPVKN +G +A +QN RRE SG+IIRSIL
Sbjct: 61  KKVLLLKGKER-------EISHHL-LQQNVTSPVKNILGANAPKQNQRREGSGRIIRSIL 112

Query: 384 LNKDSRQN-LSVHHSETQIQASNQEKDKRAPRPPNVQLFLRDTNGVPEDR-VANELHGTC 557
           LNKD+RQ+  S+  +E Q QASN EK+KR PRPP++QL  ++TNG  +D+ V N++H   
Sbjct: 113 LNKDARQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFV 172

Query: 558 TEKQEKRT 581
           +EKQ+KRT
Sbjct: 173 SEKQDKRT 180


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
           gi|223534215|gb|EEF35930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  163 bits (412), Expect = 2e-38
 Identities = 105/197 (53%), Positives = 131/197 (66%), Gaps = 4/197 (2%)
 Frame = +3

Query: 3   EKRRVST-IMYVLRDTAKSTLGKDKSTYVMVPKCDDQQISEKSV-LATASGTENLEAENG 176
           +KR   T   YVLRD+AKST GKDKSTY++VPK DDQQ S+KS   A+ASGTE LE E+ 
Sbjct: 167 QKRAAKTGSRYVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASASGTEVLEDESE 226

Query: 177 VFGTTXXXXXXXXXXXXXXXXXXXXXPHVSGGLSLQQNSASPVKNSIGVSAVRQNHRREA 356
           ++                          +SGG+S +QN+AS  KN +  SA++Q+ RRE+
Sbjct: 227 LY------------------HLCLLIVQLSGGMS-KQNAASFDKN-VTSSAIKQSQRRES 266

Query: 357 SGKIIRSILLNKDSRQNLSV-HHSETQIQASNQEKDKRAPRPPNVQLFLRDTNGVPEDR- 530
           SG+IIRSILLNKDSRQN S    SE QIQ+SN EK+KR PRP +VQL L+D NG  +D+ 
Sbjct: 267 SGRIIRSILLNKDSRQNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKF 326

Query: 531 VANELHGTCTEKQEKRT 581
           V N+LHG   EKQEKRT
Sbjct: 327 VGNDLHGFSGEKQEKRT 343


>emb|CAN72659.1| hypothetical protein VITISV_042717 [Vitis vinifera]
          Length = 437

 Score =  136 bits (342), Expect = 3e-30
 Identities = 86/170 (50%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
 Frame = +3

Query: 9   RRVSTIMYVLRDTAKSTLGKDKSTYVMVPKCDDQQISEKSV-LATASGTENLEAENGVFG 185
           RR+ST MYVLRD AK+T  KDKST+++VPK  DQ +S+KSV LA   G E L+ E+GV G
Sbjct: 247 RRLSTTMYVLRDAAKNTSAKDKSTFILVPKRADQLLSDKSVNLAAGGGAEALKEESGVSG 306

Query: 186 TTXXXXXXXXXXXXXXXXXXXXXPHVSGGLSLQQNSASPVKNSIGVSAVRQNHRREASGK 365
                                    +S  L  QQN  SPVKN +G +A +QN RRE SG+
Sbjct: 307 AVDAGKKKVLLLKGKER-------EISHHLQ-QQNVTSPVKNILGANAPKQNQRREGSGR 358

Query: 366 IIRSILLNKDSRQN-LSVHHSETQIQASNQEKDKRAPRPPNVQLFLRDTN 512
           IIRSILLNKD+RQ+  S+  SE Q QASN EK+KR PRPP  QL+ +  N
Sbjct: 359 IIRSILLNKDARQSQSSMFQSEQQSQASNLEKEKRPPRPP--QLYTQPGN 406


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